Jatropha Genome Database
- JcCA0124671.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0124671.10 - phase: 0
(591 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00209 188 1e-47
KJC_s15279 165 1e-40
KJC_c11097 76 1e-13
KJC_c05851 76 1e-13
KJC_c04074 64 4e-10
KJC_c12907 56 1e-07
>KJC_c00209
Length = 1134
Score = 188 bits (95), Expect = 1e-47
Identities = 392/491 (79%)
Strand = Plus / Plus
Query: 37 ggtgatggtgctgttgggaagacatgtatgctcatctcttacacaagcaacaccttccct 96
||||||||||||||||| ||||| || ||||||||||| ||||| |||||||| || |||
Sbjct: 199 ggtgatggtgctgttggcaagacttgcatgctcatctcctacaccagcaacacttttcct 258
Query: 97 actgattatgtccctacagtgtttgataatttcagtgctaatgtggtggttgatggtagc 156
||||| ||||| ||||| |||||||| || |||||||| |||||||| || ||||| |||
Sbjct: 259 actgactatgtgcctactgtgtttgacaacttcagtgcgaatgtggttgtggatgggagc 318
Query: 157 acagtcaatcttggattatgggatactgcaggacaggaagattataacagactaaggcct 216
||||||||||| || || ||||||||||| || |||||||||||||| ||| |||| |||
Sbjct: 319 acagtcaatctagggttgtgggatactgctggccaggaagattataatagattaagacct 378
Query: 217 ctgagttacaggggtgcagatgtgttccttttggctttctccctaataagtaaagctagc 276
|||| || | || || ||||| ||| | | |||||||| || || || || || ||
Sbjct: 379 ttgagctatcgtggggctgatgttttcttgcttgctttctctctcattagcaaggccagt 438
Query: 277 tatgagaacatttccaagaagtggattcctgagctaaggcattatgccccaactgtacca 336
||||| || || | ||||||||||||||||| | ||||||||||| || ||||||
Sbjct: 439 tatgaaaatgttgcaaagaagtggattcctgaattgaggcattatgcacctggagtacca 498
Query: 337 gttgttctagtgggtactaaactagatttgcgagacgacaagcagtatttgattgatcat 396
|| | || || || ||||| || ||| | ||||| || ||||| | || || |||||
Sbjct: 499 attatccttgttgggactaagcttgatctccgagatgataagcaattcttcatagatcac 558
Query: 397 cctggtgcaacaccaatcacaacttctcagggagaggaactaaagaagatgattggtgct 456
||||||||| || ||||| || ||||||| |||||||| | ||| | ||||| |||
Sbjct: 559 cctggtgcagtgcccatcaccacagctcagggggaggaactgagaaagctaattggagct 618
Query: 457 gctgtttacattgagtgcagctcaaagactcaacagaatgtgaaggcagtttttgacgca 516
|||||||||||||||| || || || ||||| ||||||||||| ||||| ||||| |||
Sbjct: 619 cctgtttacattgagtgtagttctaaaactcagcagaatgtgaaagcagtctttgatgca 678
Query: 517 gcaatcaaagt 527
|| || |||||
Sbjct: 679 gccattaaagt 689
>KJC_s15279
Length = 453
Score = 165 bits (83), Expect = 1e-40
Identities = 146/167 (87%)
Strand = Plus / Plus
Query: 37 ggtgatggtgctgttgggaagacatgtatgctcatctcttacacaagcaacaccttccct 96
||||||||||||||||| ||||| || ||||||||||| ||||| |||||||| || |||
Sbjct: 111 ggtgatggtgctgttggcaagacttgcatgctcatctcctacaccagcaacacttttcct 170
Query: 97 actgattatgtccctacagtgtttgataatttcagtgctaatgtggtggttgatggtagc 156
||||| ||||| ||||| |||||||| || |||||||| |||||||| || ||||| |||
Sbjct: 171 actgactatgtgcctactgtgtttgacaacttcagtgcgaatgtggttgtggatgggagc 230
Query: 157 acagtcaatcttggattatgggatactgcaggacaggaagattataa 203
||||||||||| || || ||||||||||| || ||||||||||||||
Sbjct: 231 acagtcaatctagggttgtgggatactgctggccaggaagattataa 277
>KJC_c11097
Length = 519
Score = 75.8 bits (38), Expect = 1e-13
Identities = 170/214 (79%)
Strand = Plus / Plus
Query: 11 ccaggtttatcaaatgtgttactgtaggtgatggtgctgttgggaagacatgtatgctca 70
||||||||||||| || || || || ||||||||||| ||||| || || ||| | | |
Sbjct: 220 ccaggtttatcaagtgcgtcacggtcggtgatggtgccgttggtaaaacttgtctcttga 279
Query: 71 tctcttacacaagcaacaccttccctactgattatgtccctacagtgtttgataatttca 130
| |||||||| |||||||| || ||||| ||||| || || || || ||||| |||||||
Sbjct: 280 tttcttacaccagcaacacttttcctacggattacgtgccaactgtttttgacaatttca 339
Query: 131 gtgctaatgtggtggttgatggtagcacagtcaatcttggattatgggatactgcaggac 190
|||| ||||| || || |||| ||||| || || || ||||| ||||||||||| || |
Sbjct: 340 gtgcaaatgtagttgtcaatggaagcactgttaacctgggattgtgggatactgctgggc 399
Query: 191 aggaagattataacagactaaggcctctgagtta 224
| || |||||||| || |||| ||| |||||||
Sbjct: 400 aagaggattataataggttaagacctttgagtta 433
>KJC_c05851
Length = 500
Score = 75.8 bits (38), Expect = 1e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 466 attgagtgcagctcaaagactcaacagaatgtgaaggcagtttttgacgcagcaatcaaa 525
||||| ||||||||||| |||||||||||||| ||||| |||||||| || |||||||||
Sbjct: 348 attgaatgcagctcaaaaactcaacagaatgttaaggctgtttttgatgctgcaatcaaa 289
Query: 526 gt 527
||
Sbjct: 288 gt 287
>KJC_c04074
Length = 506
Score = 63.9 bits (32), Expect = 4e-10
Identities = 72/84 (85%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 76 tacacaagcaacaccttccctactgattatgtccctacagtgtttgataatttcagtg-c 134
||||| ||||||||||||||||| |||||||| || || || ||||| |||||||||| |
Sbjct: 419 tacaccagcaacaccttccctacggattatgtaccaactgtttttgacaatttcagtgac 478
Query: 135 taatgtggtggttgatggtagcac 158
|||||||| || ||||| |||||
Sbjct: 479 aaatgtggttgtggatgggagcac 502
>KJC_c12907
Length = 662
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 40 gatggtgctgttgggaagacatgtatgctcatctcttacacaagcaacaccttccctact 99
|||||||| || || ||||| || ||||| || || ||||| |||||||||||||||||
Sbjct: 172 gatggtgccgtcggaaagacctgcatgcttatttcctacaccagcaacaccttccctacg 113
Query: 100 gattatgt 107
||||||||
Sbjct: 112 gattatgt 105