Jatropha Genome Database
- JcCA0123251.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0123251.10 + phase: 0 /partial
(918 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c06319 1376 0.0
>KJC_c06319
Length = 848
Score = 1376 bits (694), Expect = 0.0
Identities = 736/742 (99%), Gaps = 6/742 (0%)
Strand = Plus / Minus
Query: 177 taaaagactaccgccagggccaattaagctaccactgatcggaaacctacacaacttggc 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 taaaagactaccgccagggccaattaagctaccactgatcggaaacctacacaacttggc 789
Query: 237 cggtgctcagccgcaccatgcgcttacagagctagccaaagaatatggcccacttatgca 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 cggtgctcagccgcaccatgcgcttacagagctagccaaagaatatggcccacttatgca 729
Query: 297 cttacagttgggcgaaatatcagcaattgttgtatctaatccaagaatcgctcaagtgat 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 cttacagttgggcgaaatatcagcaattgttgtatctaatccaagaatcgctcaagtgat 669
Query: 357 aatgaaaacccatgatcttgtttttgcagataggcctgaaattcttgctgctaaaataat 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 aatgaaaacccatgatcttgtttttgcagataggcctgaaattcttgctgctaaaataat 609
Query: 417 cacttatggcggtcaagatatagccttttcgaaacttggcgaatattggaagcaaatgaa 476
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 608 cacttatggcggtcaagatatagccttttcgaaacttggcgaatattggaagcaaatg-a 550
Query: 477 aagaattagcttaatggagcttttaggtcctaaaacagttcaatctttcgcttcccttcg 536
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 549 aagaattagcttaatggagcttttaggtcct-aaacagttcaatctttcgcttcccttcg 491
Query: 537 cgaaaatgaagtagagaaattgatacagtctattcatttatctaaaggaaaacctataaa 596
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 490 cgaaaatgaagtagagaaattgatacagtctattcatttatct-aaggaaaacctataaa 432
Query: 597 ttttacagagaaaatcttccatcttactaatgttataacctgtaaggctgcgtttggcga 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ttttacagagaaaatcttccatcttactaatgttataacctgtaaggctgcgtttggcga 372
Query: 657 tgagtgtaaagatcaggatgttgttatagctttgactaaggaagcaacaacaattgcagg 716
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 371 tgagtgtaaagatcaggatgttgttatagctttgactaaggaagcaacaac-attgca-g 314
Query: 717 aggttttggtatagctgacgtgtttccttctatggagtttcttcaagctattactggtgt 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aggttttggtatagctgacgtgtttccttctatggagtttcttcaagctattactggtgt 254
Query: 777 taagggtaaattggagaaacttcgagacgagttaggggatgtgtttggtaatattattga 836
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 253 taagggtaaattggagaaacttcgagacgagttaggggatgtgtttggtaata-tattga 195
Query: 837 tgaacataagcagaaattgatgaatagagatggtagtgatgatgttgaatcggagaaaga 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 tgaacataagcagaaattgatgaatagagatggtagtgatgatgttgaatcggagaaaga 135
Query: 897 agatttagttgatgttctgtta 918
||||||||||||||||||||||
Sbjct: 134 agatttagttgatgttctgtta 113