Jatropha Genome Database

JcCA0117501.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0117501.10 - phase: 0 
         (303 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c03265                                                            509   e-144

>KJC_c03265 
          Length = 1249

 Score =  509 bits (257), Expect = e-144
 Identities = 257/257 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcctccaaaagcatcgaaatcaaaagaagctccagctgagcgaccaatccttggtcga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93  atgcctccaaaagcatcgaaatcaaaagaagctccagctgagcgaccaatccttggtcga 152

                                                                       
Query: 61  ttctcttctcacctcaagattggaatcgttggattacccaatgttggcaaatctactctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 ttctcttctcacctcaagattggaatcgttggattacccaatgttggcaaatctactctt 212

                                                                       
Query: 121 ttcaacacactaacaaagctgtcaattcctgctgagaacttccctttttgtactattgag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 ttcaacacactaacaaagctgtcaattcctgctgagaacttccctttttgtactattgag 272

                                                                       
Query: 181 cctaatgaggcgcgggttaatatccccgatgagagatttgagtggctttgccaactgtat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 cctaatgaggcgcgggttaatatccccgatgagagatttgagtggctttgccaactgtat 332

                            
Query: 241 aagccaaaaagcgaggt 257
           |||||||||||||||||
Sbjct: 333 aagccaaaaagcgaggt 349