Jatropha Genome Database

JcCA0116381.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0116381.10 - phase: 1 /partial
         (590 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c03154                                                             94   5e-19

>KJC_c03154 
          Length = 616

 Score = 93.7 bits (47), Expect = 5e-19
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggtaactggagatccagggaagatggttgctgttcagagaaacctnnnnnnntttggaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||       || ||||
Sbjct: 545 aggtaactggagatccagggaagatggttgctgttcagagaaacctaaaaaatttaggaa 604

                       
Query: 61  tcagagaaatag 72
           ||||||||||||
Sbjct: 605 tcagagaaatag 616