Jatropha Genome Database
- JcCA0109021.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0109021.10 + phase: 0
(369 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c10065 708 0.0
KJC_c03436 319 3e-87
>KJC_c10065
Length = 756
Score = 708 bits (357), Expect = 0.0
Identities = 364/365 (99%), Gaps = 1/365 (0%)
Strand = Plus / Plus
Query: 1 atggcaactggttttagcggcgatgaaaccgctcctttcttcggcttccttggcgccgcg 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 86 atggcaactggttttagcggcgatgaa-ccgctcctttcttcggcttccttggcgccgcg 144
Query: 61 gcggccctcgttttctcatgtatgggagctgcctatgggacagccaagagcggtgttggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 gcggccctcgttttctcatgtatgggagctgcctatgggacagccaagagcggtgttggt 204
Query: 121 gtagcatcaatgggcgttatgagaccagagctcgtgatgaaatctatagttcctgttgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gtagcatcaatgggcgttatgagaccagagctcgtgatgaaatctatagttcctgttgtt 264
Query: 181 atggctggagtgcttggtatttatggtttgattattgctgttattattagtactggaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atggctggagtgcttggtatttatggtttgattattgctgttattattagtactggaatt 324
Query: 241 aaccctaaagccaaatcatattacctcttcgatggttatgctcatctttcttccggtctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaccctaaagccaaatcatattacctcttcgatggttatgctcatctttcttccggtctg 384
Query: 301 gcctgtggtcttgctggcctttctgctggtatggctattggtattgttggagatgctggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcctgtggtcttgctggcctttctgctggtatggctattggtattgttggagatgctggc 444
Query: 361 gtcag 365
|||||
Sbjct: 445 gtcag 449
>KJC_c03436
Length = 810
Score = 319 bits (161), Expect = 3e-87
Identities = 296/341 (86%)
Strand = Plus / Minus
Query: 16 agcggcgatgaaaccgctcctttcttcggcttccttggcgccgcggcggccctcgttttc 75
|||||||||||||| ||||||||||| ||||| || |||||||| || |||||||| |||
Sbjct: 716 agcggcgatgaaactgctcctttctttggctttctcggcgccgctgctgccctcgtcttc 657
Query: 76 tcatgtatgggagctgcctatgggacagccaagagcggtgttggtgtagcatcaatgggc 135
|| |||||||||||||| ||||| ||||||||||| || |||||||| |||||||||||
Sbjct: 656 tcctgtatgggagctgcatatggaacagccaagagtggcgttggtgtggcatcaatggga 597
Query: 136 gttatgagaccagagctcgtgatgaaatctatagttcctgttgttatggctggagtgctt 195
|||||||| || ||||| |||||||| ||||| || || |||||||||||||| ||| |
Sbjct: 596 gttatgaggcctgagcttgtgatgaagtctattgtaccagttgttatggctggtgtgttg 537
Query: 196 ggtatttatggtttgattattgctgttattattagtactggaattaaccctaaagccaaa 255
||||| ||||| |||||||||||||||||||| ||||||||||||||||| || || ||
Sbjct: 536 ggtatatatggcttgattattgctgttattatcagtactggaattaaccccaaggctaag 477
Query: 256 tcatattacctcttcgatggttatgctcatctttcttccggtctggcctgtggtcttgct 315
||||||||||| || ||||| ||||| ||||| || || ||||| |||||||| ||||||
Sbjct: 476 tcatattacctttttgatgggtatgcacatctctcatctggtcttgcctgtggccttgct 417
Query: 316 ggcctttctgctggtatggctattggtattgttggagatgc 356
|| ||||||||||| ||||| ||||| |||||||| |||||
Sbjct: 416 gggctttctgctggaatggccattggaattgttggtgatgc 376