Jatropha Genome Database
- JcCA0101681.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0101681.10 + phase: 1 /pseudo/partial
(788 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03918 1275 0.0
>KJC_c03918
Length = 908
Score = 1275 bits (643), Expect = 0.0
Identities = 667/671 (99%), Gaps = 3/671 (0%)
Strand = Plus / Plus
Query: 118 gccaatatgacataatagtagatgcaacagataatgcaccaagccgttacatgatcagtg 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccaatatgacataatagtagatgcaacagataatgcaccaagccgttacatgatcagtg 60
Query: 178 attgttgtgtggtgttgggaaagcctcttgtatcaggtgcggcattgggattagaagggc 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attgttgtgtggtgttgggaaagcctcttgtatcaggtgcggcattgggattagaagggc 120
Query: 238 agctcacagtttataattacaaaggaggtccatgctatcgatgcctttttccaaccccac 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agctcacagtttataattacaaaggaggtccatgctatcgatgcctttttccaaccccac 180
Query: 298 ctcctacaacagcatgccaaagatgtgctgatagtggagttttaggagttgttcctggta 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctcctacaacagcatgccaaagatgtgctgatagtggagttttaggagttgttcctggta 240
Query: 358 tcattggttgtcttcaagcacttgaagccattaaaattgctagtgacattggtgaacctc 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcattggttgtcttcaagcacttgaagccattaaaattgctagtgacattggtgaacctc 300
Query: 418 tatcaggacggatgcttctattagatgcattgtcggcacgaattcgcattgtcaagataa 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tatcaggacggatgcttctattagatgcattgtcggcacgaattcgcattgtcaagataa 360
Query: 478 gaagcaggtcattgaattgtgaagtttgtggagaaactgcagcattcaaccaaaagcaat 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaagcaggtcattgaattgtgaagtttgtggagaaactgcagcattcaaccaaaagcaat 420
Query: 538 ttagagattttgattatgagaagttcactcagtctccattgtccacggctccaccgaagt 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttagagattttgattatgagaagttcactcagtctccattgtccacggctccaccgaagt 480
Query: 598 tgaacctgctttcagcaggctccagaataaccagtaaagacttcaacgagaaaatcgtta 657
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgaacctgctttcagcaggct-cagaataaccagtaaagacttcaacgagaaaatcgtta 539
Query: 658 aaggggaagggcacgtgttgctagatgtacgccctgcccaccatttcaagattgttgctc 717
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 540 aaggggaagggcacgtgttgctagatgtacg-cctgcccaccatttcaagattgttgctc 598
Query: 718 ttcctaacgccttgaacattccattagcaagtttggaggctaaggtggcctgaaatctca 777
||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 599 ttcctaacgccttgaacattccattagcaagtttggaggct-aggttgcctgaaatctca 657
Query: 778 tctgcattgaa 788
|||||||||||
Sbjct: 658 tctgcattgaa 668