Jatropha Genome Database
- JcCA0101091.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0101091.10 - phase: 2 /partial
(689 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00063 1318 0.0
KJC_s18190 442 e-124
KJC_s19698 295 7e-80
KJC_c02175 135 2e-31
KJC_c05624 76 1e-13
>KJC_c00063
Length = 1602
Score = 1318 bits (665), Expect = 0.0
Identities = 683/689 (99%)
Strand = Plus / Plus
Query: 1 tgaccctgaatttgctaagaagctagcttctcttgcagatgtctatgtgaatgatgcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tgaccctgaatttgctaagaagctagcttctcttgcagatgtctatgtgaatgatgcatt 548
Query: 61 tggcactgctcatagagcccatgcttccacagagggggtagctaaatacttgaaaccttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tggcactgctcatagagcccatgcttccacagagggggtagctaaatacttgaaaccttc 608
Query: 121 tgttgctggttttctgatgcagaaggaacttgattatcttgttggagctgtggcaaatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tgttgctggttttctgatgcagaaggaacttgattatcttgttggagctgtggcaaatcc 668
Query: 181 taagaagccatttgctgcaattgttggtggctcaaaggtttcaaccaagattggagtgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 taagaagccatttgctgcaattgttggtggctcaaaggtttcaaccaagattggagtgat 728
Query: 241 agagtccctcttggagaaggttgatatcctcatcttgggtggaggaatgatatttacctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 agagtccctcttggagaaggttgatatcctcatcttgggtggaggaatgatatttacctt 788
Query: 301 ctacaaggcacaggggcactcggtgggctcatcccttgtggaggaggacaaacttgatct 360
|||||||||||| || | |||||||||||||||||||||||||||||||||||||||
Sbjct: 789 ctacaaggcacacaggggataggtgggctcatcccttgtggaggaggacaaacttgatct 848
Query: 361 tgcaaatacacttatggagaaggccaaagctaagggagtgttcctacttctacccactga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 tgcaaatacacttatggagaaggccaaagctaagggagtgttcctacttctacccactga 908
Query: 421 tgtggttattgctgacaagtttgctgctgatgctaacagcaaggtggtgccagcatccag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 tgtggttattgctgacaagtttgctgctgatgctaacagcaaggtggtgccagcatccag 968
Query: 481 tattccagatggttggttgggtttggatgttggacctgattccatccagacattctgtga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969 tattccagatggttggttgggtttggatgttggacctgattccatccagacattctgtga 1028
Query: 541 agctttagatactaccaaaacggttatttggaatggaccaatgggtgtatttgagttcga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1029 agctttagatactaccaaaacggttatttggaatggaccaatgggtgtatttgagttcga 1088
Query: 601 aaagtttgcagtgggaactgaggcaattgccaagaagcttgcagagctcagtggcaaggg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1089 aaagtttgcagtgggaactgaggcaattgccaagaagcttgcagagctcagtggcaaggg 1148
Query: 661 cgtgacaactatcattggaggtggtgact 689
|||||||||||||||||||||||||||||
Sbjct: 1149 cgtgacaactatcattggaggtggtgact 1177
>KJC_s18190
Length = 488
Score = 442 bits (223), Expect = e-124
Identities = 267/280 (95%), Gaps = 9/280 (3%)
Strand = Plus / Plus
Query: 1 tgaccctgaatttgctaagaagctagcttctcttgcagatgtctatgtgaatgatgcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 tgaccctgaatttgctaagaagctagcttctcttgcagatgtctatgtgaatgatgcatt 277
Query: 61 tggcactgctcatagagcccatgcttccacagagggggtagctaaatacttgaaaccttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tggcactgctcatagagcccatgcttccacagagggggtagctaaatacttgaaaccttc 337
Query: 121 tgttgctggttttctgatgcagaaggaacttgattatcttgttggagctgtggcaaatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tgttgctggttttctgatgcagaaggaacttgattatcttgttggagctgtggcaaatcc 397
Query: 181 taagaagccatttgctgcaattgttggtggctcaaaggtttcaaccaagattggagtgat 240
||||||||||||||||||| ||| |||||| | |||||| |||||||||||||
Sbjct: 398 taagaagccatttgctgcatgtgt-----gctcaa--ggttcaac--agattggagtgat 448
Query: 241 agagtccctcttggagaaggttgatatcctcatcttgggt 280
||||||||| ||||||||||||||||||||||||||||||
Sbjct: 449 agagtccctnttggagaaggttgatatcctcatcttgggt 488
>KJC_s19698
Length = 317
Score = 295 bits (149), Expect = 7e-80
Identities = 149/149 (100%)
Strand = Plus / Minus
Query: 317 cactcggtgggctcatcccttgtggaggaggacaaacttgatcttgcaaatacacttatg 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 cactcggtgggctcatcccttgtggaggaggacaaacttgatcttgcaaatacacttatg 258
Query: 377 gagaaggccaaagctaagggagtgttcctacttctacccactgatgtggttattgctgac 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gagaaggccaaagctaagggagtgttcctacttctacccactgatgtggttattgctgac 198
Query: 437 aagtttgctgctgatgctaacagcaaggt 465
|||||||||||||||||||||||||||||
Sbjct: 197 aagtttgctgctgatgctaacagcaaggt 169
>KJC_c02175
Length = 700
Score = 135 bits (68), Expect = 2e-31
Identities = 242/300 (80%)
Strand = Plus / Plus
Query: 13 tgctaagaagctagcttctcttgcagatgtctatgtgaatgatgcatttggcactgctca 72
||||||||| || |||||| | || ||| |||||||||||||||||||||| ||||| ||
Sbjct: 390 tgctaagaaacttgcttctttagctgatctctatgtgaatgatgcatttgggactgcaca 449
Query: 73 tagagcccatgcttccacagagggggtagctaaatacttgaaaccttctgttgctggttt 132
||||| |||||||| || ||||| || | |||| ||| || || ||||||||||| ||
Sbjct: 450 cagagcacatgcttcaactgagggagtcacaaaattcttaaagccatctgttgctggctt 509
Query: 133 tctgatgcagaaggaacttgattatcttgttggagctgtggcaaatcctaagaagccatt 192
|| | |||||||| || || || |||||||| || || |||| || |||| ||||||
Sbjct: 510 cctcttacagaaggagctggactaccttgttggggcagtttcaaacccaaagaggccatt 569
Query: 193 tgctgcaattgttggtggctcaaaggtttcaaccaagattggagtgatagagtccctctt 252
||||| ||||| ||||| |||||||| ||| ||||||||||||| || || || ||| |
Sbjct: 570 cgctgccattgtgggtggttcaaaggtctcatccaagattggagttattgaatcactcct 629
Query: 253 ggagaaggttgatatcctcatcttgggtggaggaatgatatttaccttctacaaggcaca 312
|||||||| ||| |||| | ||||| ||||||||||| || || || |||||||||||
Sbjct: 630 cgagaaggtcgatgtcctgcttttgggaggaggaatgattttcactttttacaaggcaca 689
>KJC_c05624
Length = 557
Score = 75.8 bits (38), Expect = 1e-13
Identities = 52/54 (96%), Gaps = 2/54 (3%)
Strand = Plus / Plus
Query: 522 ccatccagacattctgtgaagctttagatactaccaaaacggtt-atttggaat 574
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 1 ccatccagacattctgtgaagctttagatact-ccaaaacggttaatttggaat 53