Jatropha Genome Database
- JcCA0097411.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0097411.10 - phase: 0 /partial
(1330 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01503 1411 0.0
KJC_s16112 186 9e-47
>KJC_c01503
Length = 1274
Score = 1411 bits (712), Expect = 0.0
Identities = 1136/1274 (89%), Gaps = 5/1274 (0%)
Strand = Plus / Plus
Query: 58 gattcaccggagtcagccaccgagttttcccttcctctcacctttttcgacttattctgg 117
|||| |||||| |||||||| || || || || |||||||||||| | |||||||| |||
Sbjct: 4 gatttaccggaatcagccactgaattctctctccctctcacctttcttgacttattttgg 63
Query: 118 ttaaggtttcctccggttgaacgtctctttttctaccaacttaccgatttaacccctgct 177
||||| || || || |||||||||||||||||||||||||||||||||| ||| ||| ||
Sbjct: 64 ttaagattcccaccagttgaacgtctctttttctaccaacttaccgattcaactccttct 123
Query: 178 ttcttcaattcagttatcttacctaaactcaaacactccctctctctcactcttgttctc 237
|||||||| ||||||||||||||||||||||||| |||| ||||||||||||| || | |
Sbjct: 124 ttcttcaactcagttatcttacctaaactcaaactctccttctctctcactctcgtccac 183
Query: 238 tatctccccctcgccggccaccttacatggccaccaaactctcctaaacctatcatcctt 297
||||| ||| |||| |||||||| ||||||||| ||||||||||||| || |||||||||
Sbjct: 184 tatctgcccttcgctggccacctcacatggccatcaaactctcctaagcccatcatcctt 243
Query: 298 tatactccaagcactggcgttctactcacagtcgctgagtcagacgcggacacagatcat 357
|| ||||||| | |||||||| | |||||||||| || ||||| ||||||| ||| ||
Sbjct: 244 tacactccaaacgatggcgttccattcacagtcgccgaatcagatgcggacatggattat 303
Query: 358 ctttggagtgatgagatccaagttgctacagagttacatccatatgtgccaaagttaccg 417
|||| |||||||| |||| |||||| || |||||||||||||||||||| ||||||||
Sbjct: 304 ctttccagtgatgacatccgagttgccactgagttacatccatatgtgccggagttaccg 363
Query: 418 gcatctgaaactaggtcatctgttattgctttgcaaatcactttgtttccaaataagggg 477
|||||||||||| |||||| |||||||||| ||||||||||| ||||||||||| |||
Sbjct: 364 atatctgaaactagatcatctattattgcttttcaaatcactttatttccaaataaaggg 423
Query: 478 tttagcatcggttactccattaaccatgcagttcttgacggtcaaagcgtaaccatgttt 537
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 424 tttagcatcggttactccattaaccatgcagttcttgacggtcaaagtgtaaccatgttt 483
Query: 538 atgaaagcttggtcttacatatctaaacatggtgaaagatctttattacctgaattatgt 597
|||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||| |
Sbjct: 484 atgaaagcttgggcttacatttctaaacacggtgaaagatctttattacctgaattatct 543
Query: 598 ccattttatgatcgaaatggtttaaaagacccaaaagacctcgaatcactgttcttggct 657
||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||| ||
Sbjct: 544 ccattttatgaacgaaatggtttacaagacccaaaagacctcgaatcgctgttcttgtct 603
Query: 658 cagtgggaatccataactgagtccgagtcaagaggcaatcctcgaagtttgaaagtgttg 717
|||||| | | ||||||||||||| |||||||| ||||||||||||||||||||| |||
Sbjct: 604 cagtggaattgcataactgagtccctgtcaagagacaatcctcgaagtttgaaagtattg 663
Query: 718 tcccatatagatcaagcgactaacagggttcgatctacgtttaagttaagtaccgaagac 777
||||| ||| | ||| |||||||| ||||||||||||||||||||| || | ||||||
Sbjct: 664 ccccatgtagttgaagtgactaacaaggttcgatctacgtttaagttgagcaatgaagac 723
Query: 778 ctaaacaaaat-caagaataagattttgtctcaattggaaaacccaattgatcatttatc 836
|||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 724 ttaaacaaaatagaagaagaagattttgtctcaattggaggacccaattgatcatttatc 783
Query: 837 agattttgtgattacatgtgcttacgttttagtttgcatggtaaaagcaagaggaggaga 896
|||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 784 agattttgtgattacatgtgcttatgtaatagtttgcatggtaaaagcaagaggaggaga 843
Query: 897 tgaaaatagaaccgtttggttcttgtatgctgtggattgcaggacacgtttaaa-ccctc 955
|||||||||||||||||||||||||||| ||||||||||| | | ||||||||| ||||
Sbjct: 844 tgaaaatagaaccgtttggttcttgtattctgtggattgccgaaaacgtttaaattcctc 903
Query: 956 cacttcctaaaaattactttggcaattgtattgctgctcatgatgtgattgcagtagcga 1015
||||||| | |||||| ||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 904 cacttccaagaaattattttggcaattgtattgctgttcatgaagtgattgcagtagcga 963
Query: 1016 gagatttcatggaggtaaatggattaccgattattgccaagaggattagtgaaagtataa 1075
||||||||||||| | |||||||||| ||||| ||| ||||| ||||||||||||||||
Sbjct: 964 gagatttcatggaagaaaatggattatggattactgcgaagagaattagtgaaagtataa 1023
Query: 1076 agagaataaagacaaatggagtccttgaaggagcagaagagaagctatcaagtttaaaaa 1135
|| |||| ||||||||||||| ||||||||||||||||||||||||||| ||| || |
Sbjct: 1024 aggcaatagagacaaatggagttcttgaaggagcagaagagaagctatcagttttcaaga 1083
Query: 1136 gtattaaaagtggagtacaagcgataggggttgctggatcgacccggtttggggtttacg 1195
|||| || |||||||||| ||| | ||||||||||| |||||||||||||||||||
Sbjct: 1084 gtatgaatgatggagtacaaatgattagtgttgctggatcaacccggtttggggtttacg 1143
Query: 1196 ggtatgattttgggtggggaaagcccaaaaaggtggaaataacttccatagatagaactg 1255
||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||
Sbjct: 1144 ggtgtgattttgggtggggaaagcccaaaaaggtggaaataatttcgatagataggactg 1203
Query: 1256 gtgcaatttctttcaaagagagtaaagatggaaatggaggagttgagattggattggctt 1315
| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 1204 gagcaatttctttcaaagagagtaaagatggaaat---ggagttgagattggactggctt 1260
Query: 1316 tgactagaaatgaa 1329
||| ||||||||||
Sbjct: 1261 tgaatagaaatgaa 1274
>KJC_s16112
Length = 340
Score = 186 bits (94), Expect = 9e-47
Identities = 118/126 (93%)
Strand = Plus / Plus
Query: 534 gtttatgaaagcttggtcttacatatctaaacatggtgaaagatctttattacctgaatt 593
|||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 1 gtttatgaaagcttgggcttacatttctaaacacggtgaaagatctttattacctgaatt 60
Query: 594 atgtccattttatgatcgaaatggtttaaaagacccaaaagacctcgaatcactgttctt 653
|| |||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 61 atctccattttatgaacgaaatggtttacaagacccaaaagacctcgaatcgctgttctt 120
Query: 654 ggctca 659
| ||||
Sbjct: 121 gtctca 126
Score = 133 bits (67), Expect = 1e-30
Identities = 132/151 (87%), Gaps = 2/151 (1%)
Strand = Plus / Plus
Query: 684 gtcaagaggcaatcctcgaagtttgaaagtgttgtcccatatagatcaagcgactaacag 743
|||||||| ||||||||||||||||||||| ||| ||||| ||| | ||| ||||||||
Sbjct: 192 gtcaagagacaatcctcgaagtttgaaagtattgccccatgtagttgaagtgactaacaa 251
Query: 744 ggttcgatctacgtttaagttaagtaccgaagacctaaacaaaatcaagaataagatttt 803
||||||||||||||||||||| || | |||||| ||||| |||| ||||| ||||||||
Sbjct: 252 ggttcgatctacgtttaagttgagcaatgaagacttaaac-aaatgaagaagaagatttt 310
Query: 804 gtctcaattggaaaacccaattgatcattta 834
| |||||||||| |||||||||||||||||
Sbjct: 311 g-ctcaattggaggacccaattgatcattta 340
Score = 67.9 bits (34), Expect = 6e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 656 ctcagtgggaatccataactgagtccgagtcaagaggcaatcctcgaagtttgaaagt 713
|||||||| | | ||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 186 ctcagtggaattgcataactgagtccctgtcaagagacaatcctcgaagtttgaaagt 129