Jatropha Genome Database
- JcCA0081161.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0081161.20 - phase: 0
(1104 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c07578 1118 0.0
KJC_c08650 597 e-170
>KJC_c07578
Length = 579
Score = 1118 bits (564), Expect = 0.0
Identities = 578/580 (99%), Gaps = 2/580 (0%)
Strand = Plus / Plus
Query: 3 ggcggcgatatgtttcctgtcaccagtaaaa-ccaataactttttcttcatcagtacata 61
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 ggcggcgatatgtttcctgtcaccagtaaaaaccaataactttttcttcatcagtacata 60
Query: 62 gcaaaagatcacccctcttccgctgcaacttctctctccctaccatcaccaccactgaac 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcaaaagatcacccctcttccgctgcaacttctctctccctaccatcaccaccactgaac 120
Query: 122 ccgaacccgtctacacctccgtcaggtcgtttgcccccgccactgttgccaacctcggcc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccgaacccgtctacacctccgtcaggtcgtttgcccccgccactgttgccaacctcggcc 180
Query: 182 ccggattcgacttcttgggttgtgctgtcgatggtcttggagactttgtctccgttcgaa 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccggattcgacttcttgggttgtgctgtcgatggtcttggagactttgtctccgttcgaa 240
Query: 242 tcgacccatccgtccatcccggtgagatctccatctctgacattactggaaatcatgcct 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcgacccatccgtccatcccggtgagatctccatctctgacattactggaaatcatgcct 300
Query: 302 gtaaaaagctttcaaaggatcctctccggaactgcgcaggtatctctgctattgctacca 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtaaaaagctttcaaaggatcctctccggaactgcgcaggtatctctgctattgctacca 360
Query: 362 tgaaaatgcttaatatacgctctgtgggtctttctcttacacttgaaaaaggacttccgt 421
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 361 tgaaaatgcttaatatacgctctgtgggtctttctcttacacttg-aaaaggacttccgt 419
Query: 422 tagggagtggtcttggatcgagtgcagccagtgctgcggcagctgctgttgctgtaaatg 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tagggagtggtcttggatcgagtgcagccagtgctgcggcagctgctgttgctgtaaatg 479
Query: 482 agattttcgggggaaaattagaagttaaggatttaattcttgctggattggaatctgaag 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 agattttcgggggaaaattagaagttaaggatttaattcttgctggattggaatctgaag 539
Query: 542 ctaaagtttcaggttatcatgcagataatatagcgcctgc 581
||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ctaaagtttcaggttatcatgcagataatatagcgcctgc 579
>KJC_c08650
Length = 321
Score = 597 bits (301), Expect = e-170
Identities = 308/309 (99%), Gaps = 1/309 (0%)
Strand = Plus / Minus
Query: 717 tgccttgccggaagaaattgggatgccccaccatgtctggaactgtagccaagctggggc 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tgccttgccggaagaaattgggatgccccaccatgtctggaactgtagccaagctggggc 250
Query: 777 attagttgcttctgtgctacaaggggatttgatggggttgggtaaggcactttcaaatga 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 attagttgcttctgtgctacaaggggatttgatggggttgggtaaggcactttcaaatga 190
Query: 837 taagattgtggagcctaaaagggctccattgattcccggaatggaggaagtgaagaaggc 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 taagattgtggagcctaaaagggctccattgattcccggaatggaggaagtgaagaaggc 130
Query: 897 ggctattagggcaggcgcatttgggtgtacaattagtggagcagggcctacagctgtggc 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 ggctattagggcaggcgcatttgggtgtacaattagtggagcagggcctacagctgtggc 70
Query: 957 cgtgattgataatgaggagagaggaaaggagattggggagaggatggt-ggaggcatttt 1015
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 69 cgtgattgataatgaggagagaggaaaggagattggggagaggatggtgggaggcatttt 10
Query: 1016 tgaaggaag 1024
|||||||||
Sbjct: 9 tgaaggaag 1