Jatropha Genome Database
- JcCA0081131.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0081131.10 - phase: 0
(801 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04988 664 0.0
KJC_c04305 593 e-169
>KJC_c04988
Length = 612
Score = 664 bits (335), Expect = 0.0
Identities = 364/370 (98%), Gaps = 4/370 (1%)
Strand = Plus / Minus
Query: 429 cattaggaacattgaaaagaggatagcagatttctctttcattcctgtagagcatggaga 488
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 612 cattaggaacattgaaaagaggatagcagatttctctttcattcctgcagagcatg-aga 554
Query: 489 aggacttcaaattcttcactatgaagttggacagaagtatgaagctcactatgattattt 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 553 aggacttcaaattcttcactatgaagttggacagaagtatgaagctcactatgata--tt 496
Query: 549 tcttgatgagttcaacactaagaatggtggccaacgaacagcaactcttctaatgtatct 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 tcttgatgagttcaacactaagaatggtggccaacgaacagcaactcttctaatgtatct 436
Query: 609 gtcagatgttgaagaagggggtgagacagtgtttcctgctgcccaggcaaacatcagctc 668
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gtcagatgttgaagaagggg-tgagacagtgtttcctgctgcccaggcaaacatcagctc 377
Query: 669 tgtaccatggtggaatgagttgtcagaatgtggcaaacggggtctttcagtgaaaccgaa 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tgtaccatggtggaatgagttgtcagaatgtggcaaacggggtctttcagtgaaaccgaa 317
Query: 729 gatgggcaatgcattgctgttctggagcacaaggcctgatgctacactagacccttcaag 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gatgggcaatgcattgctgttctggagcacaaggcctgatgctacactagacccttcaag 257
Query: 789 tttgcatggt 798
||||||||||
Sbjct: 256 tttgcatggt 247
>KJC_c04305
Length = 542
Score = 593 bits (299), Expect = e-169
Identities = 346/354 (97%), Gaps = 7/354 (1%)
Strand = Plus / Plus
Query: 1 atggcgaaagtgagacattccagatttcaagctaggaaatggtcgacaatgacgttgata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 atggcgaaagtgagacattccagatttcaagctaggaaatggtcgacaatgacgttgata 250
Query: 61 ctgacgatgttatttatgctaacggtggttcttttgatgcttttggctcttgggatcttt 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 251 ctgacgatgttatttatgctaacggtggttcttttgatgcttt-ggctcttgggatcttt 309
Query: 121 tctcttcctataagcaacgaggattcgactcctattgatctcaccacctcctataggcgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tctcttcctataagcaacgaggattcgactcctattgatctcaccacctcctataggcgt 369
Query: 181 atgaccgtcgaaagagatggcgatggccaggagaagagagaagagcaatggactgaaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 atgaccgtcgaaagagatggcgatggccaggagaagagagaagagcaatggactgaaatt 429
Query: 241 gtttcttgggagcctcgagcattcctctatcac-aattttttgt--caaaagaagaatgt 297
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 430 gtttcttgggagcctcgagcattcctctatcactaattttttgtactaaaagaagaatgt 489
Query: 298 g-agtacctaatagctttggctagacctcatat-ggtaaagtcaactgttgtag 349
| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 490 gtagtacctaatagctttggctagacctcatataggtaaagtcaa-tgttgtag 542