Jatropha Genome Database
- JcCA0081101.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0081101.10 + phase: 0 /pseudo/partial
(2415 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01512 494 e-139
KJC_c03441 62 7e-09
>KJC_c01512
Length = 2130
Score = 494 bits (249), Expect = e-139
Identities = 920/1141 (80%), Gaps = 2/1141 (0%)
Strand = Plus / Plus
Query: 232 gaatttgtggatggggcacttaagcatattatccagatgtccaaagtgttgggggagcaa 291
|||||||| ||||| |||||||| || || || |||||||||||||| |||| ||||||
Sbjct: 282 gaatttgttgatggtgcacttaatcacataattcagatgtccaaagttctgggagagcaa 341
Query: 292 gttggtggtggaaatcctgtgtggcctattgcaattcatgggcattatgctgatgcaggg 351
||| |||||| || || | |||||| ||||||||||||| ||||||||||| |||||
Sbjct: 342 attgctggtgggaagccaatctggcctgttgcaattcatggacattatgctgacgcaggc 401
Query: 352 gactctgctgctcttctatctggagctctcaatgttcctatgatttttactggtcattca 411
|| ||||||||||| |||||||| ||| | ||||| || ||| |||| |||||||| ||
Sbjct: 402 gattctgctgctctcctatctggtgctttaaatgtgccgatgcttttcactggtcactcc 461
Query: 412 ctgggaagagataagcttgaacaacttttgaaacaaggacggcaatcaagggaagaaata 471
|| || ||||||||| | ||||| | | |||||||| |||| ||| ||||| ||||||
Sbjct: 462 cttggcagagataagttggaacagttactaaaacaaggccggctatcgagggatgaaata 521
Query: 472 aatacaacatacaaaataatgcggcgaatagaagcagaggagttaactcttgatgcttct 531
||| | |||||||| |||||||| | ||||| || |||||||| | || ||| |||||
Sbjct: 522 aattctacatacaagataatgcgtaggatagaggctgaggagttctccctggattcttct 581
Query: 532 gagattattataactagcacccgccaggagatagaagaacaatggcgcctttatgatggc 591
||||| | |||||||| || | || |||||||| ||||| ||||| | ||||||||
Sbjct: 582 gagatagtaataactagtactagacaagagatagatgaacagtggcgtttatatgatggt 641
Query: 592 tttgatcctgtactagagcgcaaacttagagcaaggatcaagaggggagtaagctgtcat 651
|||||||| |||| ||||| ||| | |||||||| |||||| | || |||||| ||
Sbjct: 642 tttgatccaatactggagcgtaaattgagagcaagaatcaagcgcaatgtgagctgttat 701
Query: 652 ggcaggtttatgcctcgtatggtggtaattcctcccggaatggaattacaccatatcatt 711
|||||||| |||||||| |||| |||||||||| |||||||||| || || || ||
Sbjct: 702 ggcaggttcatgcctcgcatggctataattcctcctggaatggaatc-catcacattgtt 760
Query: 712 ccacataatggagatatggatgcggaagaagagaaaaatgaagagaatcctgctgctcct 771
|| || | || || ||||||| ||| ||| ||||||||| |||| || |||||
Sbjct: 761 ccccacgaaggtgacatggatggtgaaacagaaggaaatgaagaccatccaacttctcct 820
Query: 772 gatccaccaatttggtcagagataatgcgtttcttttcaaacccccgaaagcccatgata 831
||||||| ||| ||| | ||||||||||| |||||| | || || || ||||| |||||
Sbjct: 821 gatccacaaatctgggctgagataatgcgcttctttacgaatcctcgtaagccaatgatt 880
Query: 832 cttgcccttgccaggccagaccctaaaaagaatataaccactttagtcaaagcatttggt 891
||||||||||| || ||||| || || ||||| ||||| ||||| || |||||||||||
Sbjct: 881 cttgcccttgctagaccagatcccaagaagaacataacaactttggttaaagcatttgga 940
Query: 892 gaatgccaaccgctgagggaacttgctaaccttaccttaataatgggaaaccgtgatgat 951
||||| | || |||| || |||||||||||||| |||| ||||| ||||| ||||
Sbjct: 941 gaatgtcgtccattgagagagcttgctaaccttacactaattatgggtaaccgagatgga 1000
Query: 952 attgatgaaatgtcaggcccaaatgcatcttatcttctttccataattaagctcattgat 1011
||||||||||||||| || ||||||| ||| ||||||||| | ||||||| |||||
Sbjct: 1001 attgatgaaatgtcaagcacaaatgcttctgttcttctttcagtgcttaagcttattgac 1060
Query: 1012 aaatatgatctgtatggccatgtggcttatcctaaacaccacaagcagtctgatgttcct 1071
||||||||||| ||||| || || || ||||||||||||||||||||| | ||||| |||
Sbjct: 1061 aaatatgatctctatgggcaagttgcatatcctaaacaccacaagcagcc-gatgtccct 1119
Query: 1072 aatatttatcgtcttgcagcaaaaacaaagggtgttttcatcaatcctgctttcatagaa 1131
| ||||||||| | |||||||| || |||||||||||||||||||| |||||||| ||
Sbjct: 1120 gacatttatcgtttagcagcaaagaccaagggtgttttcatcaatccggctttcattgag 1179
Query: 1132 ccttttgggcttactttgatagaggctgcagcttatggcttgcctactgttgctacaaaa 1191
|| ||||||||||||||||| ||||| || ||| | || ||||| | |||||| ||||||
Sbjct: 1180 ccatttgggcttactttgattgaggcagcggctcacggtttgcccattgttgccacaaaa 1239
Query: 1192 aatgggggtcctgttgacattcttcgggtacttgataatggactgctagttgatccccat 1251
||||| ||||| || ||||| | ||||||||||| ||||| || || |||||||| |||
Sbjct: 1240 aatggaggtccagtagacatacaccgggtacttgacaatgggcttcttgttgatcctcat 1299
Query: 1252 gaccagcagtctattgccgatgctcttttgaagcttgtttcagataaacaactttgggca 1311
|| || |||||||||| ||||||||| | ||||||||| | || || || |||||||||
Sbjct: 1300 gatgagaagtctattgctgatgctcttctaaagcttgttgctgacaagcacctttgggca 1359
Query: 1312 agatgcaggcagaatggactgaaaaatattcaccttttctcatggcctgaacattgtaaa 1371
| |||| | || ||||| |||||||||||||||| ||||||||||| || ||||| |||
Sbjct: 1360 aaatgccgacaaaatgggttgaaaaatattcacctattctcatggccagagcattgcaaa 1419
Query: 1372 a 1372
|
Sbjct: 1420 a 1420
Score = 61.9 bits (31), Expect = 7e-09
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 1975 tccctttgtgttagacttggattacagttcacatatcgaataccgttggggtggagaagg 2034
|||||||||| | ||||| ||||| ||||||||| || ||||| ||||| ||||||||
Sbjct: 2012 tccctttgtggttgacttttattaccattcacatattgagtaccgatggggaggagaagg 2071
Query: 2035 cttgaggaagactttggttcgctgggc 2061
||||||||||| | |||||||||||
Sbjct: 2072 gctgaggaagactctcgttcgctgggc 2098
>KJC_c03441
Length = 929
Score = 61.9 bits (31), Expect = 7e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 182 atacgcggtgaaaacatggagcttgggcgtgattctgatacgggtgg 228
||||| |||||||| ||||||||||| |||||||||||||| |||||
Sbjct: 218 atacgaggtgaaaatatggagcttggacgtgattctgatactggtgg 172