Jatropha Genome Database
- JcCA0079341.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0079341.20 - phase: 0
(1968 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00606 113 2e-24
KJC_c04169 62 5e-09
>KJC_c00606
Length = 2302
Score = 113 bits (57), Expect = 2e-24
Identities = 150/181 (82%)
Strand = Plus / Plus
Query: 1254 gccaacccatgtgtttaatgctgctggtgttactggaaggcccaatgtcgattggtgtga 1313
|||||||||||| ||||||||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 1423 gccaacccatgtttttaatgctgctggtgttactggtaggccaaatgttgattggtgtga 1482
Query: 1314 gtcgcataagacagaaacgattaggactaatgtcgtaggtacactaactttggccgatgt 1373
|| || ||||||||||| ||| | || ||||| | ||| || | || || || |||||
Sbjct: 1483 atcccacaagacagaaaccattcgcaccaatgttgcaggaactttgacattagcagatgt 1542
Query: 1374 ttgcagagaaaacaacttattgatgatgaatttcgcaactggctgcatatttgagtatga 1433
||| || || | ||| | ||||||||||||| || |||||||| ||||||||||||||
Sbjct: 1543 ttgtagggagcataacctcctgatgatgaattttgctactggctgtatatttgagtatga 1602
Query: 1434 t 1434
|
Sbjct: 1603 t 1603
Score = 63.9 bits (32), Expect = 1e-09
Identities = 128/160 (80%)
Strand = Plus / Plus
Query: 656 tccatggtaatggctcaaatgtgagaagctatttacattgtgacgatgttgcagaggcat 715
||||||| |||| ||||||||||| || |||||| |||| || |||||||| ||||| |
Sbjct: 765 tccatggagatggttcaaatgtgaggagttatttatattgcgaggatgttgctgaggctt 824
Query: 716 ttgatgtgatccttcacaaaggggtgattggacatgtatataatatcgggactaagaagg 775
|||| || ||||||||||| || | | | || ||||| || ||||| ||||| ||||| |
Sbjct: 825 ttgaagtcatccttcacaagggagaggtgggtcatgtgtacaatattgggacaaagaaag 884
Query: 776 agagacgagttctagatgttgcccaggatatatgcaagct 815
| ||| |||| ||||||| || | || |||||||||||
Sbjct: 885 aaagaagagtgatagatgtggctaaagacatatgcaagct 924
Score = 60.0 bits (30), Expect = 2e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 478 acaaatccttactctgccacaaaagctggggctgaaatgcttgtaatggc 527
||||| || |||||||||||||||||||| || ||||||||||| |||||
Sbjct: 587 acaaacccatactctgccacaaaagctggagcagaaatgcttgttatggc 636
>KJC_c04169
Length = 715
Score = 61.9 bits (31), Expect = 5e-09
Identities = 103/127 (81%)
Strand = Plus / Plus
Query: 1258 acccatgtgtttaatgctgctggtgttactggaaggcccaatgtcgattggtgtgagtcg 1317
|||||||| || || || || ||||| ||||| ||||| || || |||||||| || ||
Sbjct: 228 acccatgtcttcaacgccgccggtgtcactggcaggcctaacgtagattggtgcgaatct 287
Query: 1318 cataagacagaaacgattaggactaatgtcgtaggtacactaactttggccgatgtttgc 1377
|||||| || || |||||||| ||||| || || || || ||||||||||||||||||
Sbjct: 288 cataaggtggagactattaggaccaatgtggtcgggacgcttactttggccgatgtttgc 347
Query: 1378 agagaaa 1384
|||||||
Sbjct: 348 agagaaa 354
Score = 56.0 bits (28), Expect = 3e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1498 tccttctattccaagactaaagccatggtagaagag 1533
||||||||||||||||||||||| ||||| ||||||
Sbjct: 467 tccttctattccaagactaaagctatggtggaagag 502