Jatropha Genome Database
- JcCA0077451.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0077451.10 - phase: 0 /pseudo
(1668 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03845 1328 0.0
>KJC_c03845
Length = 741
Score = 1328 bits (670), Expect = 0.0
Identities = 740/750 (98%), Gaps = 10/750 (1%)
Strand = Plus / Plus
Query: 562 tctggcaaatcaccagatcatacaccagagaaatacatggaatgtaggaactaccttgtt 621
||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||| |||
Sbjct: 2 tctggcaaatcac-agatcatacac-agagaa-tacatggaatgtaggaactacct-gtt 57
Query: 622 gctaaatacatggacaatccagagaagaggatcacagtttctgattttcagggagtggta 681
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 58 gctaaatacatggaca-tccagagaagaggatcacagtttctgattttcaggga-tggta 115
Query: 682 tttggtattgataacgaagatttaactcgaattgttaggtttcttgatcactggggaatt 741
|||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 tttg-tattgataacga-gatttaactcgaattgttaggtttcttgatcactggggaatt 173
Query: 742 atcaattactgtgcagccccaccaaaccgtgaatcctggaatggtggatcctacttaaga 801
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 atcaattactgtgcagccc-accaaaccgtgaatcctggaatggtggatcctacttaaga 232
Query: 802 gaggatccaaatggcgaggttcatgtgccatcagctgctttaaagtccattgatagtctg 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 gaggatccaaatggcgaggttcatgtgccatcagctgctttaaagtccattgatagtctg 292
Query: 862 atcaaatttgacaagcccacatgtaggctcaaggtagctgacctttattcatcattgcca 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 atcaaatttgacaagcccacatgtaggctcaaggtagctgacctttattcatcattgcca 352
Query: 922 tgtcacgatgccgatttctctgacttggacaacaaaattcgagagcgcctatctgaaaat 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tgtcacgatgccgatttctctgacttggacaacaaaattcgagagcgcctatctgaaaat 412
Query: 982 cattgcacttattgttctcagcctcttcctggcatttactatcagtcgcagaaggagatt 1041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 cattgcacttattgttctcagcctcttcctggcatttactatcagtcgcagaaggagatt 472
Query: 1042 gatgtcctgctatgctctgattgcttccatgaggggaggtttgtaactggacattcgacc 1101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gatgtcctgctatgctctgattgcttccatgaggggaggtttgtaactggacattcgacc 532
Query: 1102 ctggattttataaagatggatccaaccaaggattatggtgatttggatggagagagttgg 1161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ctggattttataaagatggatccaaccaaggattatggtgatttggatggagagagttgg 592
Query: 1162 agtgatcaggaaacactattgctgcttgaggcaatggaaatttacaatgaaaattggaat 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 agtgatcaggaaacactattgctgcttgaggcaatggaaatttacaatgaaaattggaat 652
Query: 1222 gaaattgcagaacatgttggaacaaaatcaaaatcacaatgcatccttcattttcttcgt 1281
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 653 gaaattgcagaacatgttggaacaaaatcaaaatcacaatgcatccttcattttc-tcgt 711
Query: 1282 ctacccatggaggatggcttgctggaaaat 1311
||||||||||||||||||||||||||||||
Sbjct: 712 ctacccatggaggatggcttgctggaaaat 741