Jatropha Genome Database

JcCA0077011.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0077011.20 - phase: 0 /pseudo/partial
         (258 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c00580                                                            151   9e-37

>KJC_c00580 
          Length = 958

 Score =  151 bits (76), Expect = 9e-37
 Identities = 109/120 (90%)
 Strand = Plus / Plus

                                                                       
Query: 7   ctagaggacgggccagacgcagcagagctacaactggggagcggattccccacgggcatg 66
           |||||||||||||||||||||||||||| |||||  ||||||||||||||||| |||| |
Sbjct: 656 ctagaggacgggccagacgcagcagagcgacaacccgggagcggattccccaccggcagg 715

                                                                       
Query: 67  gggacaggagacagctatctcggggcacatcacgacctacatgcaagacccgcaagacct 126
           |||||||||||| || |||||| |||||||||||||||||| |||||||| || ||||||
Sbjct: 716 gggacaggagacggccatctcgaggcacatcacgacctacaggcaagaccggcgagacct 775