Jatropha Genome Database
- JcCA0076441.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0076441.10 + phase: 0
(660 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03154 1063 0.0
>KJC_c03154
Length = 616
Score = 1063 bits (536), Expect = 0.0
Identities = 546/548 (99%), Gaps = 1/548 (0%)
Strand = Plus / Plus
Query: 53 ctgcttctgcttttgctttgaactctgcttttggtgcccc-ctcttccttggcaatttcg 111
||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 ctgctactgcttttgctttgaactctgcttttggtgcccccctcttccttggcaatttcg 60
Query: 112 acatgcaccaccaaccattaccaccgtagaaggaagctcgtagtctctgctactgctgct 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acatgcaccaccaaccattaccaccgtagaaggaagctcgtagtctctgctactgctgct 120
Query: 172 gataatcataacaacatttctactagtgtatcttcttcttctataactttatcaaaaaag 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gataatcataacaacatttctactagtgtatcttcttcttctataactttatcaaaaaag 180
Query: 232 gttaggagacatactatctctgtgtttgttggcgatgaaagtggaatgattaatcgaatt 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttaggagacatactatctctgtgtttgttggcgatgaaagtggaatgattaatcgaatt 240
Query: 292 gcaggggtttttgcgagaaggggatataatattgagtcgcttgctgttggtctgaacaag 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcaggggtttttgcgagaaggggatataatattgagtcgcttgctgttggtctgaacaag 300
Query: 352 gataaggcccttttcaccattgttgtctctggaactgaaaaagtgctacaacaagttgta 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gataaggcccttttcaccattgttgtctctggaactgaaaaagtgctacaacaagttgta 360
Query: 412 gagcagcttcagaaacttgtcaatgttttaaaggttgaagatctctccagtgagccacag 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagcagcttcagaaacttgtcaatgttttaaaggttgaagatctctccagtgagccacag 420
Query: 472 gtagaacgggagctgatgcttataaaagtgaatgcagatcctaattatcgtgctgagatc 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtagaacgggagctgatgcttataaaagtgaatgcagatcctaattatcgtgctgagatc 480
Query: 532 aagtggttggttgaaattttcagagcaaaaattgtggatatctcagagcactcagtcaca 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aagtggttggttgaaattttcagagcaaaaattgtggatatctcagagcactcagtcaca 540
Query: 592 attgaggt 599
||||||||
Sbjct: 541 attgaggt 548