Jatropha Genome Database
- JcCA0075601.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0075601.10 - phase: 0
(1089 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01971 2143 0.0
KJC_c01548 408 e-113
KJC_c02261 68 5e-11
>KJC_c01971
Length = 1527
Score = 2143 bits (1081), Expect = 0.0
Identities = 1087/1089 (99%)
Strand = Plus / Plus
Query: 1 atggatcgatctgcggttactgtaggcccgggaatggatatgccgattatgcacgatagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 atggatcgatctgcggttactgtaggcccgggaatggatatgccgattatgcacgatagc 340
Query: 61 gaccggtatgagctggtgcgagatatcgggtccggaaatttcggggtggcgagattgatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gaccggtatgagctggtgcgagatatcgggtccggaaatttcggggtggcgagattgatg 400
Query: 121 agggacaagcatactgatgagcttgttgctgtcaagtatatcgagagaggtgagaagata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 agggacaagcatactgatgagcttgttgctgtcaagtatatcgagagaggtgagaagata 460
Query: 181 gatgaaaatgtacaaagggaaattattaatcacaggtcattgaggcatcctaacattgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gatgaaaatgtacaaagggaaattattaatcacaggtcattgaggcatcctaacattgtc 520
Query: 241 agattcaaagaggtcatattaacaccaacacacttggctattgtaatggagtatgcatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 agattcaaagaggtcatattaacaccaacacacttggctattgtaatggagtatgcatct 580
Query: 301 ggtggtgaactttttgagcgaatatgcaatgcaggccggttcagcgaggatgaggcacgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ggtggtgaactttttgagcgaatatgcaatgcaggccggttcagcgaggatgaggcacgc 640
Query: 361 tttttcttccaacaacttatatcaggagttagttactttcatgcaatgcaagtatgccac 420
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 ttttttctccaacaacttatatcaggagttagttactttcatgcaatgcaagtatgccac 700
Query: 421 cgtgacttaaaattggagaatacactgttagatggaagccaagcacctcgtttaaagatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 cgtgacttaaaattggagaatacactgttagatggaagccaagcacctcgtttaaagatt 760
Query: 481 tgtgactttggttactctaagtcatcggtgctccattcacaaccaaactctactgttgga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 tgtgactttggttactctaagtcatcggtgctccattcacaaccaaactctactgttgga 820
Query: 541 actcctgcgtatattgcacctgaagtgttacttaagaaggaatatgatggcaagattgca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 actcctgcgtatattgcacctgaagtgttacttaagaaggaatatgatggcaagattgca 880
Query: 601 gatgtatggtcatgtggggtaacattatatgtaatgttggtgggagcatatccttttgag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 gatgtatggtcatgtggggtaacattatatgtaatgttggtgggagcatatccttttgag 940
Query: 661 gaccctgaggagcctaagaatttccgcaggacaattcatcgaattttgaatgtccagtac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 gaccctgaggagcctaagaatttccgcaggacaattcatcgaattttgaatgtccagtac 1000
Query: 721 tcgattcctgactatgttcatatatctcctgagtgccggcatctcatctcaagaatattt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1001 tcgattcctgactatgttcatatatctcctgagtgccggcatctcatctcaagaatattt 1060
Query: 781 gtggctgacgctgcgaagaggattagcattcctgaaatcaggaatcatgagtggtttctg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1061 gtggctgacgctgcgaagaggattagcattcctgaaatcaggaatcatgagtggtttctg 1120
Query: 841 aagaatcttccggcagatctcatggacgaaaatatgggcaaacagtttgaagagcctgat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1121 aagaatcttccggcagatctcatggacgaaaatatgggcaaacagtttgaagagcctgat 1180
Query: 901 cagccaatgcagagccttgatgagatcatgcaaataatatccgaagccaccataccagca 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1181 cagccaatgcagagccttgatgagatcatgcaaataatatccgaagccaccataccagca 1240
Query: 961 gctggcacccgtagtctcaatcagtatttgactggcagcctagatattgatgatgacatg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1241 gctggcacccgtagtctcaatcagtatttgactggcagcctagatattgatgatgacatg 1300
Query: 1021 gaggaggacctagagactgatcctgaacttgacatggatagcagtggagagatagtgtat 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1301 gaggaggacctagagactgatcctgaacttgacatggatagcagtggagagatagtgtat 1360
Query: 1081 gcaatgtga 1089
|||||||||
Sbjct: 1361 gcaatgtga 1369
>KJC_c01548
Length = 946
Score = 408 bits (206), Expect = e-113
Identities = 677/832 (81%), Gaps = 4/832 (0%)
Strand = Plus / Plus
Query: 139 gagcttgttgctgtcaagtatatcgagagaggtgagaagatagatgaaaatgtacaaagg 198
|||||||||||||| || |||||||| |||||||| ||||| |||| |||||| |||| |
Sbjct: 98 gagcttgttgctgtgaaatatatcgaaagaggtgacaagattgatggaaatgttcaaaag 157
Query: 199 -gaaattattaatcacaggtcattgaggcatcctaacattgtcagattcaaagaggtcat 257
||||||||||||||||||||| | ||||| || || ||||| || || |||||||||||
Sbjct: 158 agaaattattaatcacaggtcactaaggcaccccaatattgtgaggtttaaagaggtcat 217
Query: 258 attaacaccaacacacttggctattgtaatggagtatgcatctggtggtgaactttttga 317
||||| || || || |||||||||| ||||| ||||| ||||| || || ||||||||
Sbjct: 218 cttaactcctacccatctggctattgtgatggaatatgcctctggaggagagctttttga 277
Query: 318 gcgaatatgcaatgcaggccggttcagcgaggatgaggcacgctttttcttccaacaact 377
| |||||||||||| || || || |||||||||||||| || || || || || |||||
Sbjct: 278 gaaaatatgcaatgctggacgatttagcgaggatgaggctcgattcttttttcagcaact 337
Query: 378 tatatcaggagttagttactttcatgcaatgcaagtatgccaccgtgacttaaaattgga 437
|| ||||||||||| || | |||||| ||||||||||| |||||||| | || |||||
Sbjct: 338 catttcaggagttagctattgtcatgctatgcaagtatgtcaccgtgatctgaagttgga 397
Query: 438 gaatacactgttagatggaagccaagcacctcgtttaaagatttgtgactttggttactc 497
|||||| | | ||||| || || || |||||||| || |||||||| ||||| |||||
Sbjct: 398 gaatactttactggatggtagtcaggctcctcgtttgaaaatttgtgattttggatactc 457
Query: 498 taagtcatcggtgctccattcacaaccaaactctactgttggaactcctgcgtatattgc 557
|||||||||||||| |||||||||||||| || ||||| ||||||||||| || |||||
Sbjct: 458 caagtcatcggtgcttcattcacaaccaaaatcaactgtaggaactcctgcttacattgc 517
Query: 558 acctgaagtgttacttaagaaggaatatgatggcaagattgcagatgtatggtcatgtgg 617
|| || ||||| | | | | ||||||||||||||||||||||| || |||||||||||
Sbjct: 518 tccagaggtgttgttgaggcaagaatatgatggcaagattgcagacgtgtggtcatgtgg 577
Query: 618 ggtaacattatatgtaatgttggtgggagcatatccttttgaggaccctgaggagcctaa 677
||||||||| ||||| ||| |||| |||||||||||||||||||| ||||| ||||| ||
Sbjct: 578 ggtaacattgtatgtgatgctggttggagcatatccttttgaggatcctgatgagccaaa 637
Query: 678 gaatttccgcaggacaattcatcgaattttgaatgtccagtactcgattcctgactatgt 737
| | ||| | | |||||| || ||||| ||||||||||||| || ||||||||| ||
Sbjct: 638 ggacttcaggaagacaatacagagaattctgaatgtccagtattccattcctgacatggt 697
Query: 738 tcatatatctcctgagtgccggcatctcatctcaagaatatttgtggctgacgctgcgaa 797
|| |||||||||||||| | | || || || |||| ||||| ||| ||||
Sbjct: 698 tcggatatctcctgagtgttgtgacctgatttctcgaatttttgtttttgatcctgcagc 757
Query: 798 gaggattagcattcctgaaatcaggaatcatgagtggtttctgaagaatcttccggcaga 857
||||||| |||||| |||||| ||| ||||| |||||| ||||||||||||| ||
Sbjct: 758 aaggattaccattccacaaatcaagaaccatgactggtttgtgaagaatcttcctatgga 817
Query: 858 tctcatggacgaaaa---tatgggcaaacagtttgaagagcctgatcagccaatgcagag 914
|| ||||| ||||| ||||| || |||||||||||||||||||| |||||||||||
Sbjct: 818 cctaatggatgaaaacacaatggggaatcagtttgaagagcctgatcaaccaatgcagag 877
Query: 915 ccttgatgagatcatgcaaataatatccgaagccaccataccagcagctggc 966
| |||| |||||||||||||| || || |||||||||||||| ||||||
Sbjct: 878 cattgacaccatcatgcaaataatttctgaggccaccataccagctgctggc 929
>KJC_c02261
Length = 1376
Score = 67.9 bits (34), Expect = 5e-11
Identities = 232/298 (77%)
Strand = Plus / Minus
Query: 451 gatggaagccaagcacctcgtttaaagatttgtgactttggttactctaagtcatcggtg 510
||||| |||| |||||| ||| | || || ||||| |||||||| ||||||||||| ||
Sbjct: 682 gatggcagcccagcaccacgtctgaaaatctgtgattttggttattctaagtcatccttg 623
Query: 511 ctccattcacaaccaaactctactgttggaactcctgcgtatattgcacctgaagtgtta 570
|| |||||| ||| || || || ||||| ||||| || |||||||| || || || |
Sbjct: 622 ctgcattcaagacccaaatccacagttggcactccggcttatattgccccagaggttctt 563
Query: 571 cttaagaaggaatatgatggcaagattgcagatgtatggtcatgtggggtaacattatat 630
|| || ||||||||||||||||| |||||||||||||| ||||| || || | |||
Sbjct: 562 tctaggagagaatatgatggcaagatggcagatgtatggtcctgtggagtgactctgtat 503
Query: 631 gtaatgttggtgggagcatatccttttgaggaccctgaggagcctaagaatttccgcagg 690
|| ||| |||| |||||||| || ||||| || | ||||| || ||||||| | | | |
Sbjct: 502 gttatgctggtaggagcatacccatttgaagatcaagaggacccaaagaattacaggaag 443
Query: 691 acaattcatcgaattttgaatgtccagtactcgattcctgactatgttcatatatctc 748
||||| || |||| || |||||||||| ||| ||||| |||||||| |||||||
Sbjct: 442 acaatcaatagaataatggctgtccagtacaagatccctgattatgttcacatatctc 385