Jatropha Genome Database
- JcCA0075211.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0075211.10 + phase: 0
(1410 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c08653 1057 0.0
KJC_c07587 716 0.0
KJC_c01073 345 2e-94
KJC_c10112 60 2e-08
>KJC_c08653
Length = 596
Score = 1057 bits (533), Expect = 0.0
Identities = 589/597 (98%), Gaps = 8/597 (1%)
Strand = Plus / Minus
Query: 199 gaagtggagcgtgctctagcaaaattaggaggcccagccaaactta-ctggaaaatcttc 257
||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||
Sbjct: 596 gaagtggagcgtgctctagcaaa-ttaggaggcccagccaaacttaactggaaa-tcttc 539
Query: 258 tccaaaatgtataggggggcctgatggaagaaacttgcagttgcacttcagatccaggat 317
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tccaaaatgtataggggg-cctgatggaagaaacttgcagttgcacttcagatccaggat 480
Query: 318 gtcccttcctctctttactggtgggaaagtcgaaggggagcagggtgctgcaatccatat 377
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 479 gtcccttcctctctttactggtgggaaagtcgaaggg-agcagggtgctgcaatccatat 421
Query: 378 tgtgttgattgatgcaaatacaggccatgttgtcacatttggtcctgaatcctcagtgaa 437
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 420 tgtgttgattgatgcaaatacaggccatgt-gtcacatttggtcctgaatcctcagtgaa 362
Query: 438 attagatgttattgttcttgaaggtgattttaataatgaagatgttgataactggactca 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 attagatgttattgttcttgaaggtgattttaataatgaagatgttgataactggactca 302
Query: 498 ggaagaatttgactctcatatagttaaagagcgtgaggggaagaggccactcctaactgg 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggaagaatttgactctcatatagttaaagagcgtgaggggaagaggccactcctaactgg 242
Query: 558 ggatttgcaagtgacgctgaaagaaggtgtaggaactctaggagagttgacatttactga 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggatttgcaagtgacgctgaaagaaggtgtaggaactctaggagagttgacatttactga 182
Query: 618 caactcaagctggattagaagcaggaagtttaggctaggattgaaggtttccccaggcta 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caactcaagctggattagaagcaggaagtttaggctaggattgaaggtttccccaggcta 122
Query: 678 ttgtgaaggggttcgtattcgtgaagcc-aaaactgatgcctttactgtcaaggatcacc 736
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 121 ttgtgaaggggttcgtattcgtgaagccaaaaactgatgcctttactgtcaaggatcacc 62
Query: 737 -ggggagaattatacaagaaacattatccacctgcattaaatgatgaggtctggaga 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gggggagaattatacaagaaacattatccacctgcattaaatgatgaggtctggaga 5
>KJC_c07587
Length = 470
Score = 716 bits (361), Expect = 0.0
Identities = 368/369 (99%), Gaps = 1/369 (0%)
Strand = Plus / Minus
Query: 982 aaactttacgtgtactatcctgatgatgcaaagaatgttggtgttgttttcaacaatatc 1041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 aaactttacgtgtactatcctgatgatgcaaagaatgttggtgttgttttcaacaatatc 411
Query: 1042 tatgagttgagtggcttaattgctaatggacagtactattcagcagaatctctttctgac 1101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tatgagttgagtggcttaattgctaatggacagtactattcagcagaatctctttctgac 351
Query: 1102 agccagaaggtgcatgtggatgaattggtgaagaaggcgtatgagaattggatgcatgtt 1161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 agccagaaggtgcatgtggatgaattggtgaagaaggcgtatgagaattggatgcatgtt 291
Query: 1162 atagagtatgatggcaaaacacttctagactttaaggagaatgagaacatagctgcttcc 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 atagagtatgatggcaaaacacttctagactttaaggagaatgagaacatagctgcttcc 231
Query: 1222 caaattgatattcctaccagtcaacaggactatttgaactcttatgaccatcaagttact 1281
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 caaattgata-tcctaccagtcaacaggactatttgaactcttatgaccatcaagttact 172
Query: 1282 ttaccgaccatatcagttccagtgcctccagagcagcctgctatggactcgggtccaact 1341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 ttaccgaccatatcagttccagtgcctccagagcagcctgctatggactcgggtccaact 112
Query: 1342 gttggaggt 1350
|||||||||
Sbjct: 111 gttggaggt 103
>KJC_c01073
Length = 2260
Score = 345 bits (174), Expect = 2e-94
Identities = 749/940 (79%), Gaps = 3/940 (0%)
Strand = Plus / Minus
Query: 92 gaaaacggcctgctttagctagcgttattgttgaagctctcaaggtggatagtctgcaga 151
|||| ||||||||||| ||||| || ||||| |||||||| |||| ||| ||||||||||
Sbjct: 2092 gaaagcggcctgctttggctagtgtcattgtagaagctcttaaggcggacagtctgcaga 2033
Query: 152 aactttgctcatcactggagcctattcttaggagagttgttagtgaagaagtggagcgtg 211
| || |||||||| ||||| ||||||||| | |||||||| ||||| |||||||| ||||
Sbjct: 2032 agctctgctcatctctggaacctattcttcgcagagttgtaagtgaggaagtggaacgtg 1973
Query: 212 ctctagcaaaattaggaggcccagccaaacttactggaaaatcttctccaaaatgtatag 271
|| ||||||| || || ||| | | | | | |||| |||| |||||| | || |
Sbjct: 1972 ctttagcaaagttggg---ccctcctagaatcaacggaaggacttccccaaaacgcattg 1916
Query: 272 gggggcctgatggaagaaacttgcagttgcacttcagatccaggatgtcccttcctctct 331
|| | ||||| |||| || ||||||||||||||||||||| |||| |||||||| |
Sbjct: 1915 aaggtcgagatgggagaagtttacagttgcacttcagatccaggttgtctcttcctcttt 1856
Query: 332 ttactggtgggaaagtcgaaggggagcagggtgctgcaatccatattgtgttgattgatg 391
| || || || ||||| || || || ||||||||||||||||| ||||| |||||||||
Sbjct: 1855 tcacaggaggaaaagtagagggagaacagggtgctgcaatccacattgttctgattgatg 1796
Query: 392 caaatacaggccatgttgtcacatttggtcctgaatcctcagtgaaattagatgttattg 451
| || | ||||||||||| || ||| |||||| |||| |||||| |||||||| | |
Sbjct: 1795 ctaacagtggccatgttgtgactgctggccctgaagcctctgtgaaactagatgttgtgg 1736
Query: 452 ttcttgaaggtgattttaataatgaagatgttgataactggactcaggaagaatttgact 511
| ||||||||||||||||| |||||||||| ||| ||||||| ||||||||||||||
Sbjct: 1735 tgcttgaaggtgattttaacaatgaagatgatgaagactggacacaggaagaatttgaaa 1676
Query: 512 ctcatatagttaaagagcgtgaggggaagaggccactcctaactggggatttgcaagtga 571
|||| | || ||||||||||| || ||||| ||||| | |||||||| ||||||||||
Sbjct: 1675 gtcatgttgtaaaagagcgtgaaggaaagagaccactgttgactggggacttgcaagtga 1616
Query: 572 cgctgaaagaaggtgtaggaactctaggagagttgacatttactgacaactcaagctgga 631
| ||||| ||||| || ||||| || || ||| | || ||||| || ||||| |||||||
Sbjct: 1615 ccctgaaggaaggggttggaacactgggggagcttacttttaccgataactcgagctgga 1556
Query: 632 ttagaagcaggaagtttaggctaggattgaaggtttccccaggctattgtgaaggggttc 691
| || ||||||||||||||||| || |||||||| | | || | || ||| || |||
Sbjct: 1555 taaggagcaggaagtttaggcttggcctgaaggttgtctctggattttttgagggtattc 1496
Query: 692 gtattcgtgaagccaaaactgatgcctttactgtcaaggatcaccggggagaattataca 751
| |||||||| || || || || || |||||||| || |||||| | || ||| | ||||
Sbjct: 1495 gcattcgtgaggctaagacagaggcttttactgtgaaagatcacagaggggaactctaca 1436
Query: 752 agaaacattatccacctgcattaaatgatgaggtctggagattggagaagattgggaagg 811
||||||| ||||| |||||| | |||||||| || |||||||||||||| ||||||||||
Sbjct: 1435 agaaacactatccccctgcactgaatgatgacgtatggagattggagaaaattgggaagg 1376
Query: 812 atggatctttccacaagaggctgaataaagctgggatatttactgttgaagacttcttac 871
|||| || || || |||| ||| |||| | |||||||| |||||||| ||| | |
Sbjct: 1375 atggttcctttcataagaagctaaatagtcataaaatatttacagttgaagatttcctgc 1316
Query: 872 ggcttgtagtcagggactctcagagattgaggaatattcttggaagtggcatgtcaaata 931
| ||| | |||||||| |||| | ||| |||||||||| || ||| |||||||| |
Sbjct: 1315 gtcttctggtcagggatcctcaaaagttgcggaatattctggggtctggtatgtcaaaca 1256
Query: 932 agatgtgggatgttcttgtagagcatgcgaagacttgtgttctgagtgggaaactttacg 991
| |||||||| | ||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 1255 aaatgtgggaggcacttgtagagcatgcgaagacttgtgccctgagtgggaagctttata 1196
Query: 992 tgtactatcctgatgatgcaaagaatgttggtgttgtttt 1031
| || ||||| || ||| ||| |||||||||||||||||
Sbjct: 1195 tctattatccggaagattcaagaaatgttggtgttgtttt 1156
>KJC_c10112
Length = 397
Score = 60.0 bits (30), Expect = 2e-08
Identities = 98/118 (83%), Gaps = 2/118 (1%)
Strand = Plus / Minus
Query: 99 gcctgctttagctagcgttattgttgaagctctc-aaggtggatagtctgcagaaacttt 157
|||||||||||| || |||||||| |||||| | |||||| ||||| |||| | |||||
Sbjct: 256 gcctgctttagcaagtgttattgtggaagcttttgaaggtg-atagtttgcaaagacttt 198
Query: 158 gctcatcactggagcctattcttaggagagttgttagtgaagaagtggagcgtgctct 215
||||||| |||| ||| | || | ||| ||||||| ||||||||||||||||||||
Sbjct: 197 gctcatctttggaacctttgtttcgcagaattgttagcgaagaagtggagcgtgctct 140