Jatropha Genome Database
- JcCA0074421.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0074421.20 - phase: 0 /partial
(393 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00521 763 0.0
KJC_c01131 168 6e-42
>KJC_c00521
Length = 3022
Score = 763 bits (385), Expect = 0.0
Identities = 392/393 (99%), Gaps = 1/393 (0%)
Strand = Plus / Minus
Query: 1 atacaatcatcttggctggtgccgagtatgggagtggaagttctcgtgattgggctagcc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 634 atacaatcatcttggctggtgccgagtatgggagtggaagttctcgtgattgggct-gcc 576
Query: 61 aagggtccaatgctattgggtgtaaaagcagtgatagcaaagagctttgagagaattcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 aagggtccaatgctattgggtgtaaaagcagtgatagcaaagagctttgagagaattcat 516
Query: 121 cgtagtaatttggtcggcatgggtattattccattatgtttcaagactggtgaggatgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 cgtagtaatttggtcggcatgggtattattccattatgtttcaagactggtgaggatgct 456
Query: 181 gatacacttggattgactggccatgaacgctatagcattgatctcccgaatagcgtaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gatacacttggattgactggccatgaacgctatagcattgatctcccgaatagcgtaagt 396
Query: 241 gaaattagaccgggtcaagatgtcaaagtgttgacagataatggcaagtcatttacatgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gaaattagaccgggtcaagatgtcaaagtgttgacagataatggcaagtcatttacatgc 336
Query: 301 accttacgttttgatacagaggtggaactggcatattttgatcatggaggtatcttgcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 accttacgttttgatacagaggtggaactggcatattttgatcatggaggtatcttgcaa 276
Query: 361 tatgtcatcaggaacctgattcatgcaaaacat 393
|||||||||||||||||||||||||||||||||
Sbjct: 275 tatgtcatcaggaacctgattcatgcaaaacat 243
>KJC_c01131
Length = 1654
Score = 168 bits (85), Expect = 6e-42
Identities = 170/197 (86%), Gaps = 1/197 (0%)
Strand = Plus / Plus
Query: 10 tcttggctggtgccgagtatgggagtggaagttctcgtgattgggctagccaagggtcca 69
|||||||||| ||||||||||| |||||||| || | ||||||||| ||||||||||||
Sbjct: 1223 tcttggctggagccgagtatggaagtggaagctccagagattgggct-gccaagggtcca 1281
Query: 70 atgctattgggtgtaaaagcagtgatagcaaagagctttgagagaattcatcgtagtaat 129
||||||||||| || ||||| ||||| || || || |||||||||||||| || ||||||
Sbjct: 1282 atgctattgggagttaaagcggtgattgctaaaagttttgagagaattcaccgcagtaat 1341
Query: 130 ttggtcggcatgggtattattccattatgtttcaagactggtgaggatgctgatacactt 189
||||| || ||||| ||||||||| | ||||||||| ||||| ||||||| ||||||||
Sbjct: 1342 ttggtgggaatgggaattattccactttgtttcaaggctggtcaggatgcagatacacta 1401
Query: 190 ggattgactggccatga 206
|| |||||||| |||||
Sbjct: 1402 gggttgactggtcatga 1418