Jatropha Genome Database
- JcCA0071361.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0071361.10 + phase: 0
(627 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03906 611 e-175
KJC_c12118 174 2e-43
KJC_c02448 159 1e-38
KJC_c06446 109 8e-24
KJC_c10306 96 1e-19
KJC_c03168 96 1e-19
KJC_c05837 68 3e-11
KJC_c04805 50 6e-06
>KJC_c03906
Length = 556
Score = 611 bits (308), Expect = e-175
Identities = 329/332 (99%), Gaps = 3/332 (0%)
Strand = Plus / Minus
Query: 219 attcgtatgtgagatctgtaacaaaggttttcaaagagatcagaatcttcaacttcacag 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 attcgtatgtgagatctgtaacaaaggttttcaaagagatcagaatcttcaacttcacag 495
Query: 279 aagaggacataaccttccatggaaactgaa-gcaaagaaacagcaaagaaataaaaaaga 337
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 494 aagaggacataaccttccatggaaactgaaagcaaagaaacagcaaagaaataaaaa-ga 436
Query: 338 gagcatatgtttgtcctgaaccatcttgtgttcatcatcatccttctagagctcttggtg 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gagcatatgtttgtcctgaaccatcttgtgttcatcatcatccttctagagctcttggtg 376
Query: 398 accttacaggtatcaagaaacactactgtagaaaacatggagaaaagaaatggaaatgtg 457
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 accttacaggtatca-gaaacactactgtagaaaacatggagaaaagaaatggaaatgtg 317
Query: 458 aaaaatgttcaaagatctacgctgttcaatctgattggaaagctcattctaaaacttgtg 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aaaaatgttcaaagatctacgctgttcaatctgattggaaagctcattctaaaacttgtg 257
Query: 518 gaactagagagtatagatgtgactgtggaacc 549
||||||||||||||||||||||||||||||||
Sbjct: 256 gaactagagagtatagatgtgactgtggaacc 225
>KJC_c12118
Length = 661
Score = 174 bits (88), Expect = 2e-43
Identities = 149/168 (88%), Gaps = 1/168 (0%)
Strand = Plus / Minus
Query: 379 ccttctagagctcttggtgaccttacaggtatcaagaaacactactgtagaaaacatgga 438
|||||||| ||||||||||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 173 ccttctagggctcttggtgaccttactggtatcaagaaacactattcaagaaaacatggt 114
Query: 439 ga-aaagaaatggaaatgtgaaaaatgttcaaagatctacgctgttcaatctgattggaa 497
|| ||| |||||||| ||||| ||||||||||||| || ||||| ||||||||||||||
Sbjct: 113 gagaaaaaaatggaagtgtgagaaatgttcaaagagatatgctgtgcaatctgattggaa 54
Query: 498 agctcattctaaaacttgtggaactagagagtatagatgtgactgtgg 545
||| |||||||| |||||||| || ||||| |||||||||||||||||
Sbjct: 53 agcccattctaagacttgtggcaccagagaatatagatgtgactgtgg 6
>KJC_c02448
Length = 719
Score = 159 bits (80), Expect = 1e-38
Identities = 290/360 (80%)
Strand = Plus / Minus
Query: 190 tctccaaagactttattagctacaaatagattcgtatgtgagatctgtaacaaaggtttt 249
|||||||| || ||||||| ||||| ||||| |||||||||||||||||||||| |||
Sbjct: 714 tctccaaaaacactattagcaacaaacagatttatatgtgagatctgtaacaaaggattt 655
Query: 250 caaagagatcagaatcttcaacttcacagaagaggacataaccttccatggaaactgaag 309
||||||||||| |||||||||||||| |||||||| |||||||| |||||||| | |||
Sbjct: 654 caaagagatcaaaatcttcaacttcatagaagaggtcataacctgccatggaagttaaag 595
Query: 310 caaagaaacagcaaagaaataaaaaagagagcatatgtttgtcctgaaccatcttgtgtt 369
||||||| | ||| ||| | | |||| | |||||| ||||| ||| | | |||||
Sbjct: 594 caaagaacaaacaaggaagtgaggaagaaggtatatgtatgtccagaagctacatgtgta 535
Query: 370 catcatcatccttctagagctcttggtgaccttacaggtatcaagaaacactactgtaga 429
|||||| | || || |||||||| || ||||||||||| ||||| || ||| | |||
Sbjct: 534 catcatgacccatcaagagctctaggagaccttacaggaatcaaaaacaactttagcaga 475
Query: 430 aaacatggagaaaagaaatggaaatgtgaaaaatgttcaaagatctacgctgttcaatct 489
|| ||||| || ||||| ||||| |||||||| || || || || || |||||||||
Sbjct: 474 aagcatggtgagaagaagtggaagtgtgaaaagtgctctaaacgttatgccgttcaatct 415
Query: 490 gattggaaagctcattctaaaacttgtggaactagagagtatagatgtgactgtggaacc 549
|| |||||||| ||||| || | |||||| || ||||||||||||||||| || ||||||
Sbjct: 414 gactggaaagcccattccaagatttgtggcacaagagagtatagatgtgattgcggaacc 355
>KJC_c06446
Length = 815
Score = 109 bits (55), Expect = 8e-24
Identities = 170/207 (82%), Gaps = 1/207 (0%)
Strand = Plus / Minus
Query: 343 tatgtttgtcctgaaccatcttgtgttcatcatcatccttctagagctcttggtgacctt 402
|||||||||||||| || |||||| |||||| | || || || |||||||| ||| |
Sbjct: 391 tatgtttgtcctgagacaagttgtgtccatcatgacccatcaagggctcttggagactta 332
Query: 403 acaggtatcaagaaacactactgtagaaaacatggagaaaagaaatgg-aaatgtgaaaa 461
||||| |||||||| |||| || ||||| ||||| || ||||| ||| |||||||| ||
Sbjct: 331 acaggaatcaagaagcacttttgcagaaagcatggtgagaagaagtgggaaatgtgataa 272
Query: 462 atgttcaaagatctacgctgttcaatctgattggaaagctcattctaaaacttgtggaac 521
|| ||||||| || || |||||||| |||||||||||||| || ||||| ||||| ||
Sbjct: 271 gtgctcaaagaggtatgcggttcaatcagattggaaagctcactccaaaacatgtggcac 212
Query: 522 tagagagtatagatgtgactgtggaac 548
|||||| || |||||||||||||||||
Sbjct: 211 tagagaatacagatgtgactgtggaac 185
>KJC_c10306
Length = 589
Score = 95.6 bits (48), Expect = 1e-19
Identities = 123/148 (83%)
Strand = Plus / Minus
Query: 166 ccagatgcagaagtgatagcattatctccaaagactttattagctacaaatagattcgta 225
||||||||||||||||||||| ||||||| ||||| | | || ||||| || ||| ||
Sbjct: 203 ccagatgcagaagtgatagcactatctcccaagacactgatggcaacaaacaggttcata 144
Query: 226 tgtgagatctgtaacaaaggttttcaaagagatcagaatcttcaacttcacagaagagga 285
||||| | || |||||||||||||||||||| || || || || || ||||||||||||
Sbjct: 143 tgtgaagtatgcaacaaaggttttcaaagagagcaaaacctacagctccacagaagagga 84
Query: 286 cataaccttccatggaaactgaagcaaa 313
|| ||||| |||||||| || |||||||
Sbjct: 83 cacaacctcccatggaagctaaagcaaa 56
>KJC_c03168
Length = 846
Score = 95.6 bits (48), Expect = 1e-19
Identities = 177/220 (80%)
Strand = Plus / Plus
Query: 329 taaaaaagagagcatatgtttgtcctgaaccatcttgtgttcatcatcatccttctagag 388
|||| ||||||| |||||||||||||| || ||||||||||||| |||| |||||||
Sbjct: 45 taaagaagagagtttatgtttgtcctgagccgacttgtgttcatcacgatccatctagag 104
Query: 389 ctcttggtgaccttacaggtatcaagaaacactactgtagaaaacatggagaaaagaaat 448
|| | || || |||||||| || ||||| || | || || ||||| || || ||||| |
Sbjct: 105 ctttaggcgatcttacagggataaagaagcatttttgcaggaaacacggcgagaagaagt 164
Query: 449 ggaaatgtgaaaaatgttcaaagatctacgctgttcaatctgattggaaagctcattcta 508
||||||| || || ||||| |||| || || ||||| ||||||||||||||||| || |
Sbjct: 165 ggaaatgcgataagtgttcgaagaaatatgcagttcagtctgattggaaagctcactcca 224
Query: 509 aaacttgtggaactagagagtatagatgtgactgtggaac 548
||| |||||| ||||| || |||| ||| || ||||||||
Sbjct: 225 aaatttgtggcactagggaatataaatgcgattgtggaac 264
>KJC_c05837
Length = 885
Score = 67.9 bits (34), Expect = 3e-11
Identities = 98/118 (83%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 160 ccagacccagatgcagaagtgatagcattatctccaaagactttattagctac-aaatag 218
||||| |||||||| ||||||||||| ||||| ||||||||| ||||||| || |||| |
Sbjct: 849 ccagatccagatgctgaagtgatagctttatcgccaaagactctattagccacaaaatcg 790
Query: 219 attcgtatgtgagatctgtaacaaaggttttcaaagagatcagaatcttcaacttcac 276
|| || || |||||||| |||||||| || ||| | || ||||| || |||||||||
Sbjct: 789 ttttgtgtgcgagatctgcaacaaaggcttccaacgggaccagaacctccaacttcac 732
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 508 aaaacttgtggaactagagagtata 532
|||||||||||||||||||||||||
Sbjct: 503 aaaacttgtggaactagagagtata 479
>KJC_c04805
Length = 897
Score = 50.1 bits (25), Expect = 6e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 226 tgtgagatctgtaacaaaggttttcaaagagatcagaatct 266
||||||||||| ||| |||| ||||||||||| ||||||||
Sbjct: 735 tgtgagatctgcaaccaagggtttcaaagagaccagaatct 695