Jatropha Genome Database

JcCA0071331.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0071331.10 + phase: 1 /partial/short
         (110 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c08288                                                            218   2e-57

>KJC_c08288 
          Length = 385

 Score =  218 bits (110), Expect = 2e-57
 Identities = 110/110 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   agccaaatgagtggaatcgcattgtaaagaaggttattgaaaccgacaatagctggcata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 agccaaatgagtggaatcgcattgtaaagaaggttattgaaaccgacaatagctggcata 110

                                                             
Query: 61  aaacagcggggaagtatattgaaacttatgactcggttagagtgagatcc 110
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 aaacagcggggaagtatattgaaacttatgactcggttagagtgagatcc 60