Jatropha Genome Database
- JcCA0071061.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0071061.10 - phase: 2 /TE
(4186 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04660 888 0.0
KJC_c08597 728 0.0
KJC_c10366 492 e-138
KJC_c12872 387 e-106
KJC_c07611 58 2e-07
>KJC_c04660
Length = 606
Score = 888 bits (448), Expect = 0.0
Identities = 572/608 (94%), Gaps = 4/608 (0%)
Strand = Plus / Minus
Query: 3101 ggcctaaaacagagtcctcgagcttggtttggt-agattttg-caatgtggttcaccaat 3158
||||||||||||||||||||||||||||||||| |||||||| ||||||||| || ||||
Sbjct: 606 ggcctaaaacagagtcctcgagcttggtttggttagattttgtcaatgtggtacatcaat 547
Query: 3159 ttggcatgcagaagagtacttctgatcattctgtatttttcagaagtactaacaccggtt 3218
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 546 ttggcatgcagaagagtacttctgatcattctgtatttttcagaagtactaagactggtt 487
Query: 3219 tgattctacttgtggtttacgttgatgacattgttattacagggagtgattctgcaggca 3278
||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||
Sbjct: 486 tgattctacttgtggtttatgttgatgacattgttattacagggagtgattcagccggca 427
Query: 3279 ttacatcactcaagtcattcctccagactcagttccagacaaaagacttaggattgttga 3338
||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||
Sbjct: 426 ttacatcactcaagtcatttctccagacccaattccagacaaaagacttaggattgttga 367
Query: 3339 agtattttttgggtatagaagtatctaggtgtaagagaggcatcttcttatctcaaagga 3398
|||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 -gtattttt-gggtattgaagtatctaggtgtaagagaggcatcttcttatctcaaagga 309
Query: 3399 agtatgtccttgacttactgaaggaaactggaaagttgggtgccaagccatgcagtgctc 3458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 agtatgtccttgacttactgaaggaaactggaaagttgggtgccaagccatgcagtgctc 249
Query: 3459 caatgactccaaatttgcaactttcaattggtggtgagctatttgatgatcctgagatgt 3518
|||||||||| ||||||||||||||||||| |||| || ||||||||||||| |||||||
Sbjct: 248 caatgactcctaatttgcaactttcaattgatggtaagatatttgatgatcccgagatgt 189
Query: 3519 atagaaggttagtgggtaaattgaattatcttaccgtaacacgtccagatattgcttact 3578
||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 188 atagaagattagtgggcaaactgaattatcttaccgtaacacgtccagatattgcttact 129
Query: 3579 ctgtgagcgtcctgagccagtttatgtcttctcctactgttatccattgggaagctttag 3638
|||||||| || | ||||| ||||||||||||||||||| || |||||||||||||||
Sbjct: 128 ctgtgagcatcttaagccaatttatgtcttctcctactgatagtcattgggaagctttat 69
Query: 3639 gacaaattttgtgctacttgaaaggtaatccaggtcgtggcctgctttacagtaatcata 3698
||||||||||||||| |||||||| ||||||||| ||||||| ||||||||||||||||
Sbjct: 68 gacaaattttgtgctgcttgaaagttaatccaggctgtggcctcctttacagtaatcata 9
Query: 3699 ggcatttg 3706
||||||||
Sbjct: 8 ggcatttg 1
>KJC_c08597
Length = 545
Score = 728 bits (367), Expect = 0.0
Identities = 405/415 (97%), Gaps = 2/415 (0%)
Strand = Plus / Minus
Query: 3772 atattgtgtctttgtaggtggaaacttgatatcatggaggagcaagaaacaaaatgtagt 3831
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 atattgtgt-tttgtaggtggaaacttgatatcatggaggagcaagaaacaaaatgtagt 487
Query: 3832 ctcacgatcgagtgttgaatcagaatatcgagctatggcacaatctgcttgtgaattaat 3891
||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 486 ctcacgatcgagtaataaatcagaatatcgagcaatggcacaatctgcttgtgaattaat 427
Query: 3892 ttggattcgtcagttgttagaggaaattggcttcaagtcatccttgcctgcaaagttatg 3951
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ttggat-cgtcagttgttagaggaaattggcttcaagtcatccttgcctgcaaagttatg 368
Query: 3952 gtgtgataatcaagctgctcttcacattgcatcaaatccagtattccatgaacgaacaaa 4011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gtgtgataatcaagctgctcttcacattgcatcaaatccagtattccatgaacgaacaaa 308
Query: 4012 acatatcgagattgattgtcgtttcattcgtgaaaagatacaacagggtgttatctctac 4071
||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 307 acatatcgagattaattgtcatttcattcgtgaaaagatacaacaaggtgttatctctac 248
Query: 4072 aggacacgttaaaacaagtgaacagttaggggatatctttacaaaagctctaaacggacc 4131
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 247 aggacacgttaaaacaagtgaacagttaggggatatctttacaaaagctttaaacggacc 188
Query: 4132 ccgggttgactatctttgtaacaagttaggcatgattaatatctatgctccaact 4186
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ccgggttgactatctttgtaacaagttaggcatgattaatatctatgctccaact 133
>KJC_c10366
Length = 460
Score = 492 bits (248), Expect = e-138
Identities = 359/392 (91%), Gaps = 3/392 (0%)
Strand = Plus / Minus
Query: 1261 caggatcttttgacgaagcggattattggtagagtacgtgagtctggtggcctttatctt 1320
||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 391 caggatcttttaacgaagcggattattggtagaggacgtgagtctggtggcctttatctt 332
Query: 1321 ctggatgaacaagtttcgtcatctctggcttgtgttggtgctctctctcctcttgaggtt 1380
| ||||||||||||||| ||||||||||||| || ||||||||| ||||||||||| ||
Sbjct: 331 cgggatgaacaagtttcatcatctctggcttctgctggtgctctatctcctcttgaaatt 272
Query: 1381 cattgccatttgggtcatcctgcattgactactttaaagaagttgtgtccgctgtttcag 1440
||||| | ||||||||||||| ||||||| ||||||||||| || ||||||| |||||||
Sbjct: 271 cattgtcgtttgggtcatccttcattgacaactttaaagaacttatgtccgcagtttcag 212
Query: 1441 tctttatcgattttagaatgtgaatcttgtcaattttccaaacattatcgtttaccttta 1500
|||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 211 tctttatcaattttagaatgtgaatcttgtcaatttgccaaacaccatcgtttaccttta 152
Query: 1501 gttcctcgagtcaataaacgagcttcatccccttttgagttagttcattctgatgtttgg 1560
||||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |
Sbjct: 151 gttcctcgaataaataaacgggtttcatccccttttgagttagttcattctcatgttt-g 93
Query: 1561 ggttcatgtcctgttatttctaaaactggctttcgatattttgt-aacttttgtggatga 1619
||| ||||||||||||||||||||||||||||| | |||||||| ||||||||||||||
Sbjct: 92 ggtccatgtcctgttatttctaaaactggcttttggtattttgtgtacttttgtggatga 33
Query: 1620 -ttattctcgtgttacttggttatttttaatg 1650
|||||||| ||||||||||||||||||||||
Sbjct: 32 tttattctcatgttacttggttatttttaatg 1
Score = 89.7 bits (45), Expect = 5e-17
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 954 tcctactacatgtcttatatctacctcatcatagtgggtc-attgattctggttgcacag 1012
||||| || ||||||||| |||||||||||| |||||||| |||||| ||||||||||||
Sbjct: 460 tcctattatatgtcttatgtctacctcatcagagtgggtcgattgatcctggttgcacag 401
Query: 1013 atcatatgacagg 1025
|||||||||||||
Sbjct: 400 atcatatgacagg 388
>KJC_c12872
Length = 692
Score = 387 bits (195), Expect = e-106
Identities = 247/263 (93%), Gaps = 1/263 (0%)
Strand = Plus / Plus
Query: 3922 cttcaagtcatccttgcctgcaaagttatggtgtgataatcaagctgctcttcacattgc 3981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 cttcaagtcatccttgcctgcaaagttatggtgtgataatcaagctgctcttcacattgc 350
Query: 3982 atcaaatccagtattccatgaacgaacaaaacatatcgagattgattgtcgtttcattcg 4041
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 351 atcaaatccagtattccatgaacgaacaaaacatatcgagattgattgtcatttcattcg 410
Query: 4042 tgaaaagatacaacagggtgttatctctacaggacacgttaaaacaagtgaacagttagg 4101
||||||||||||||| || ||||||||||||| ||||||||||||||||| |||||||
Sbjct: 411 tgaaaagatacaacaaagtattatctctacagggtacgttaaaacaagtgaaaagttagg 470
Query: 4102 ggatatctttacaaaagctctaaacggaccccgggttgactatctttgtaacaagttagg 4161
||||||||||||||||||||||| ||||| || || ||||||||||| ||||||| ||
Sbjct: 471 agatatctttacaaaagctctaaatggacctcgaattaactatctttgt-acaagttggg 529
Query: 4162 catgattaatatctatgctccaa 4184
||||||||| |||||||||||||
Sbjct: 530 catgattaacatctatgctccaa 552
>KJC_c07611
Length = 674
Score = 58.0 bits (29), Expect = 2e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 4146 tttgtaacaagttaggcatgattaatatctatgctccaact 4186
||||||||||||| |||||||||| |||||||||||||||
Sbjct: 588 tttgtaacaagttgagcatgattaacatctatgctccaact 628