Jatropha Genome Database
- JcCA0068901.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0068901.10 - phase: 0 /partial
(801 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c08295 1168 0.0
>KJC_c08295
Length = 632
Score = 1168 bits (589), Expect = 0.0
Identities = 629/636 (98%), Gaps = 5/636 (0%)
Strand = Plus / Minus
Query: 17 atggtatcacaatgggatgtggggcaggaatttcattaccaggaatgtttcgcattgtaa 76
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 632 atggtatcacaatgg-atgtggg-caggaatttcattaccaggaatgtttcgcattgtaa 575
Query: 77 ct-gataaaacagttttttctcatcctgaggctcaaattggttaccatcctgatgcgggg 135
|| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 574 ctagataaaacagttttttctcatcctgaggctcaaattggttaccatcctgatncgggg 515
Query: 136 gcttcttattatctttctcgcttacctggttacctgggggaatacttggcattaacagga 195
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 514 gcttcttattatctttctcgcttacctggttacctgggg-aatacttggcattaacagga 456
Query: 196 gataagcttaatggtgcagagatgatagcatgtgggcttgctacccactactcattaaat 255
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gataagcttaatggtgcagagatgatagcatgtgggcttgctacccactactcattaaaa 396
Query: 256 gtgaaacttccttgggttgaggaacgccttggtggattgatcacagatgatcgtactgtc 315
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gtgaaacttccttgg-ttgaggaacgccttggtggattgatcacagatgatcgtactgtc 337
Query: 316 atagagacttctcttgcacagtatggtgatcttgtctatctggaaaagacaagtgtcctc 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 atagagacttctcttgcacagtatggtgatcttgtctatctggaaaagacaagtgtcctc 277
Query: 376 cataagattgagacgcttgataaatgtttcggccatgatacaatagaggaaattattgat 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 cataagattgagacgcttgataaatgtttcggccatgatacaatagaggaaattattgat 217
Query: 436 gcactagaaaatgaggcagctagctcttgtgatgaatggtgcaaaagagcactgataaaa 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gcactagaaaatgaggcagctagctcttgtgatgaatggtgcaaaagagcactgataaaa 157
Query: 496 ataaaagaagcatctccactaagcttaaaagttgccttgcgctcaataagagaaggtaga 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ataaaagaagcatctccactaagcttaaaagttgccttgcgctcaataagagaaggtaga 97
Query: 556 tttcaaacgctggatcagtgtctagctcgcgaatatagaatatcccttactgggatctcc 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 tttcaaacgctggatcagtgtctagctcgcgaatatagaatatcccttactgggatctcc 37
Query: 616 aaaacggtttctaaagatttgtttgagggtgttcgg 651
||||||||||||||||||||||||||||||||||||
Sbjct: 36 aaaacggtttctaaagatttgtttgagggtgttcgg 1