Jatropha Genome Database

JcCA0066671.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0066671.10 - phase: 2 /partial
         (235 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c04044                                                            369   e-102

>KJC_c04044 
          Length = 747

 Score =  369 bits (186), Expect = e-102
 Identities = 189/190 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   attttttaattctcatgatcgagaatttcatgtagcatctcttccatataagcctgattt 60
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 attttttaattctcatgaccgagaatttcatgtagcatctcttccatataagcctgattt 498

                                                                       
Query: 61  caaggttatgccagagggttgggatggtaccatcaaagacctggatgaagtccactatga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 caaggttatgccagagggttgggatggtaccatcaaagacctggatgaagtccactatga 438

                                                                       
Query: 121 gatatccatgaaagaggatgaaatgctgtatcaagaatttgtccaaaagatgaacttcaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gatatccatgaaagaggatgaaatgctgtatcaagaatttgtccaaaagatgaacttcaa 378

                     
Query: 181 caaaatgaaa 190
           ||||||||||
Sbjct: 377 caaaatgaaa 368