Jatropha Genome Database

JcCA0066651.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0066651.10 - phase: 0 /partial
         (572 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c06667                                                            402   e-112

>KJC_c06667 
          Length = 505

 Score =  402 bits (203), Expect = e-112
 Identities = 212/215 (98%)
 Strand = Plus / Minus

                                                                       
Query: 358 ggtgagtgtgatcaagttaaggaggaactgaaggaggggatttgttctggttcagatttt 417
           |||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||
Sbjct: 505 ggtgagtgtgatcaagttaaggaggaactgaagaggggaatttgttctggttcagatttt 446

                                                                       
Query: 418 gagaactcaatcaaagtccaaaaagtagatgatacgtgtgctttgcctagaacagttgat 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gagaactcaatcaaagtccaaaaagtagatgatacgtgtgctttgcctagaacagttgat 386

                                                                       
Query: 478 atggaagggaaggaagttaatgctaatgactcctcgcctgttaaagatgctagtcatgtt 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atggaagggaaggaagttaatgctaatgactcctcgcctgttaaagatgctagtcatgtt 326

                                              
Query: 538 tctgcggaggtaatttctggttgtattgagaatca 572
           |||||||||||||||||||||||||||||||||||
Sbjct: 325 tctgcggaggtaatttctggttgtattgagaatca 291