Jatropha Genome Database

JcCA0066621.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0066621.10 + phase: 2 /partial
         (175 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c04579                                                            347   5e-96

>KJC_c04579 
          Length = 485

 Score =  347 bits (175), Expect = 5e-96
 Identities = 175/175 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttaacagcagctgcactgactgcttcaatggtgatgccagatgtggctgaagctgctga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 tttaacagcagctgcactgactgcttcaatggtgatgccagatgtggctgaagctgctga 266

                                                                       
Query: 61  actttctccatctctcaagaacttcttgcttagcattgtagctggtggagttgtgcttac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 actttctccatctctcaagaacttcttgcttagcattgtagctggtggagttgtgcttac 326

                                                                  
Query: 121 tgccattgtaggtgctgtgattggtgttgctaatttcgaccctgtcaagcggagc 175
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tgccattgtaggtgctgtgattggtgttgctaatttcgaccctgtcaagcggagc 381