Jatropha Genome Database

JcCA0066101.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0066101.10 + phase: 1 /partial
         (204 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c06943                                                            404   e-113

>KJC_c06943 
          Length = 939

 Score =  404 bits (204), Expect = e-113
 Identities = 204/204 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   gaactaaagttgaaggaattttgcgacagtctgctgatgttgaggaggttgaacgcagag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gaactaaagttgaaggaattttgcgacagtctgctgatgttgaggaggttgaacgcagag 211

                                                                       
Query: 61  ttcaagaatatgaacaaggaaagtctgaatttgaaccagatgaagatgctcatgttgttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ttcaagaatatgaacaaggaaagtctgaatttgaaccagatgaagatgctcatgttgttg 151

                                                                       
Query: 121 gtgattgtgtcaagcatgtcctaagggagctgccctcctctccagttccagcatcttgct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 gtgattgtgtcaagcatgtcctaagggagctgccctcctctccagttccagcatcttgct 91

                                   
Query: 181 gcactgcattgctggaggcttata 204
           ||||||||||||||||||||||||
Sbjct: 90  gcactgcattgctggaggcttata 67