Jatropha Genome Database
- JcCA0066091.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0066091.10 - phase: 1 /partial
(682 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01420 882 0.0
KJC_c08746 315 8e-86
>KJC_c01420
Length = 963
Score = 882 bits (445), Expect = 0.0
Identities = 473/477 (99%), Gaps = 4/477 (0%)
Strand = Plus / Minus
Query: 160 aaggtgatgggattttggttccagtcccacaatacccactttactctgctgccatatctc 219
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 963 aaggtgatgggattttggttccagtcccacaatacccactt-actctgctgccatatctc 905
Query: 220 tgtttggt-ggttccctcgtaccatattacctggaagagacagcaaattggggtcttgac 278
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 tgtttggtcggttccctcgtaccatattacctggaagagacagcaaattggggtcttgac 845
Query: 279 attaatgacctgcggcatgcagttgctgaagctcgtgctaaaggaataactgtaagagca 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 attaatgacctgcggcatgcagttgctgaagctcgtgctaaaggaataactgtaagagca 785
Query: 339 atggtgattattaacccaggtaaccccactggtcagtgtcttagtgaagctaatttgagg 398
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 784 atggtgattattaacccaggtaaccc-actggtcagtgtcttagtgaagctaatttgagg 726
Query: 399 gaaattttgcgcttttgttaccaagagaacttggcccttcttggagatgaagtttatcag 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 gaaattttgcgcttttgttaccaagagaacttggcccttcttggagatgaagtttatcag 666
Query: 459 cagaacatataccaggatgagcgcccctttattagtgctagaaaggttttgctggatatg 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 cagaacatataccaggatgagcgcccctttattagtgctagaaaggttttgctggatatg 606
Query: 519 gggccacccataagcaaggaagttcagcttgtttctttccacacagtgtccaaaggatat 578
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 605 gggccacccataagcaaggaagttcagcttg-ttctttccacacagtgtccaaaggatat 547
Query: 579 tggggtgaatgcgggcagcggggtggatactttgaaatgaccaacattccacctaag 635
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tggggtgaatgcgggcagcggggtggatactttgaaatgaccaacattccacctaag 490
>KJC_c08746
Length = 532
Score = 315 bits (159), Expect = 8e-86
Identities = 166/167 (99%), Gaps = 1/167 (0%)
Strand = Plus / Plus
Query: 1 gtgcttacagtgactcccgaggtatgccaggaataagaaaggaggtggcagagttcattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gtgcttacagtgactcccgaggtatgccaggaataagaaaggaggtggcagagttcattg 412
Query: 61 aaaggcgtgatggatatccaagtgatccagaacatatatttctcaccgatggtgctag-c 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 413 aaaggcgtgatggatatccaagtgatccagaacatatatttctcaccgatggtgctagac 472
Query: 120 aaaggagtaatgcagctcttgaatacaataatccgtggtgaaggtga 166
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 aaaggagtaatgcagctcttgaatacaataatccgtggtgaaggtga 519