Jatropha Genome Database
- JcCA0065831.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0065831.10 - phase: 1 /partial
(458 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00071 852 0.0
KJC_c00135 357 2e-98
KJC_s20186 54 3e-07
>KJC_c00071
Length = 1672
Score = 852 bits (430), Expect = 0.0
Identities = 445/450 (98%)
Strand = Plus / Minus
Query: 9 aagactgttgatgggccatcaatgaaggactggagaggtggaagagctgcctccttcaac 68
|||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 756 aagactgttgatgggccatcaagcaaggattggagaggtggaagagctgcttccttcaac 697
Query: 69 atcattcctagcagcactggagctgctaaggctgttgggaaggtgctacctgctctgaac 128
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 atcattcctagcagcacaggagctgctaaggctgttgggaaggtgctacctgctctgaac 637
Query: 129 ggcaagcttactggaatggctttccgtgttccaactgttgatgtctctgtggttgatctc 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 ggcaagcttactggaatggctttccgtgttccaactgttgatgtctctgtggttgatctc 577
Query: 189 actgttaggctagagaaggctgctacatatgaacaaattaaagctgctatcaaagaggag 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 actgttaggctagagaaggctgctacatatgaacaaattaaagctgctatcaaagaggag 517
Query: 249 tctgagggaaagctgaagggaatattgggctatgtcgaggaagatctggtttcctctgac 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tctgagggaaagctgaagggaatattgggctatgtcgaggaagatctggtttcctctgac 457
Query: 309 ttcattggtgacaacaggtcaagtatttttgatgccaaagctggaattgctttgaatgat 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ttcattggtgacaacaggtcaagtatttttgatgccaaagctggaattgctttgaatgat 397
Query: 369 aagtttgtgaagcttgtttcttggtacgacaatgaggttggttacagcacccgggtggtt 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 aagtttgtgaagcttgtttcttggtacgacaatgaggttggttacagcacccgggtggtt 337
Query: 429 gacttgatctgccatatggcatctcatcat 458
||||||||||||||||||||||||||||||
Sbjct: 336 gacttgatctgccatatggcatctcatcat 307
>KJC_c00135
Length = 1268
Score = 357 bits (180), Expect = 2e-98
Identities = 345/400 (86%)
Strand = Plus / Plus
Query: 1 ccactcagaagactgttgatgggccatcaatgaaggactggagaggtggaagagctgcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ccactcagaagactgttgatgggccatcaatgaaggactggagaggtggaagagctgcct 673
Query: 61 ccttcaacatcattcctagcagcactggagctgctaaggctgttgggaaggtgctacctg 120
|||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||
Sbjct: 674 ccttcaacatcattcctagcagcactggagctgctaaggctgttggaaaggttcttcctg 733
Query: 121 ctctgaacggcaagcttactggaatggctttccgtgttccaactgttgatgtctctgtgg 180
| || || ||||| | ||||||||| | ||||||||||||||||| ||||| ||||| |
Sbjct: 734 cacttaatggcaaattgactggaatgtcattccgtgttccaactgtggatgtttctgttg 793
Query: 181 ttgatctcactgttaggctagagaaggctgctacatatgaacaaattaaagctgctatca 240
|||| || ||||| ||||| || ||| || |||||||| | || |||||||| ||||
Sbjct: 794 ttgaccttactgtcaggcttgaaaagaaggcaacatatgaggacatcaaagctgcaatca 853
Query: 241 aagaggagtctgagggaaagctgaagggaatattgggctatgtcgaggaagatctggttt 300
| |||||||||||||| ||||| |||||||| ||||||||| || || ||| | || |
Sbjct: 854 aggaggagtctgagggcaagcttaagggaatcttgggctatactgaagatgatgtagtgt 913
Query: 301 cctctgacttcattggtgacaacaggtcaagtatttttgatgccaaagctggaattgctt 360
| |||||||| | || || | ||| |||||||||||||||||||| || ||||||||||
Sbjct: 914 cttctgactttgtgggcgatagcagatcaagtatttttgatgccaaggcaggaattgctt 973
Query: 361 tgaatgataagtttgtgaagcttgtttcttggtacgacaa 400
||||||| || |||||||| ||||| |||||||| |||||
Sbjct: 974 tgaatgacaactttgtgaaacttgtctcttggtatgacaa 1013
>KJC_s20186
Length = 152
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 243 gaggagtctgagggaaagctgaagggaatattgggctat 281
|||||||||||||| ||||| |||||||| |||||||||
Sbjct: 80 gaggagtctgagggcaagcttaagggaatcttgggctat 42