Jatropha Genome Database
- JcCA0065711.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0065711.10 + phase: 0
(834 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03682 1402 0.0
>KJC_c03682
Length = 1168
Score = 1402 bits (707), Expect = 0.0
Identities = 714/715 (99%), Gaps = 1/715 (0%)
Strand = Plus / Minus
Query: 116 ccaatagcggcactaagtactccactccgtttgcctcctccttgtttagttttaacgtct 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1168 ccaatagcggcactaagtactccactccgtttgcctcctccttgtttagttttaacgtct 1109
Query: 176 ttcccctccgctggtttctcaccgccgcgttctttcaaaaacggaaaggatttcgtagat 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1108 ttcccctccgctggtttctcaccgccgcgttctttcaaaaacggaaaggatttcgtagat 1049
Query: 236 ctttatatagatgcttgattttctttgctgtagggttctttttgggtttgttcttgtttg 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1048 ctttatatagatgcttgattttctttgctgtagggttctttttgggtttgttcttgtttg 989
Query: 296 gtcctttggaaaatgatgtccagaatcacgacttctccttcgagatcaagccgccgcatg 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988 gtcctttggaaaatgatgtccagaatcacgacttctccttcgagatcaagccgccgcatg 929
Query: 356 tcaatgttcaattggatgacggcggcggcgataatcgcggtattaagcgagacgtttttg 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 tcaatgttcaattggatgacggcggcggcgataatcgcggtattaagcgagacgtttttg 869
Query: 416 ccctaaattctgtgagtttgggggttgatacgcaagttaattacatttcgagatttgatt 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 ccctaaattctgtgagtttgggggttgatacgcaagttaattacatttcgagatttgatt 809
Query: 476 atgttccgaggaagcaattaatcgtgattacgccaacatataatcgtgctttgcaggcct 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 atgttccgaggaagcaattaatcgtgattacgccaacatataatcgtgctttgcaggcct 749
Query: 536 tctttctgaatagattagggcaagttctaaggctagtgcagcctccgttactgtggattg 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 tctttctgaatagattagggcaagttctaaggctagtgcagcctccgttactgtggattg 689
Query: 596 tggtggaaatgaaaaccgcctctgtggagacggcagaaattttgaggaagacgggagcta 655
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 tggtgg-aatgaaaaccgcctctgtggagacggcagaaattttgaggaagacgggagcta 630
Query: 656 tgtataggcatttggtttgcgagagaaattcgactaatgttaaagacagaggagtccacc 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tgtataggcatttggtttgcgagagaaattcgactaatgttaaagacagaggagtccacc 570
Query: 716 agaggaatgtggctttggagcacatagagaggcataggcttgatggtattgcttactttg 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 agaggaatgtggctttggagcacatagagaggcataggcttgatggtattgcttactttg 510
Query: 776 ccgatgatgataatgtttattcgcttgagttgttcgagagcttaagagatatcag 830
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ccgatgatgataatgtttattcgcttgagttgttcgagagcttaagagatatcag 455