Jatropha Genome Database
- JcCA0064101.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0064101.10 - phase: 1 /pseudo/partial
(1184 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01773 1166 0.0
KJC_c08315 682 0.0
KJC_c05446 62 3e-09
>KJC_c01773
Length = 1082
Score = 1166 bits (588), Expect = 0.0
Identities = 588/588 (100%)
Strand = Plus / Plus
Query: 597 cgatttggtcacttgaagatgtctgattttcttgcttatgcactaaaatccatagcccag 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgatttggtcacttgaagatgtctgattttcttgcttatgcactaaaatccatagcccag 60
Query: 657 tttcttaaacctgagctagaagctctatttgatagcactcccaatgagtttgactccttt 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttcttaaacctgagctagaagctctatttgatagcactcccaatgagtttgactccttt 120
Query: 717 gatgatatattaaaactctatgaaggaggtattaagcttcctgatggacctttactagat 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatgatatattaaaactctatgaaggaggtattaagcttcctgatggacctttactagat 180
Query: 777 aatgttatgaaaaacattcctttcgagatgcttaaggaaattttccgaactgatggagag 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatgttatgaaaaacattcctttcgagatgcttaaggaaattttccgaactgatggagag 240
Query: 837 cggcttttcaagtttccaatgcctcaagtaattaaagagagcaagactgcttggaggact 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cggcttttcaagtttccaatgcctcaagtaattaaagagagcaagactgcttggaggact 300
Query: 897 gatgaggaatttggtagagaaatgttagctggtataaatcctgtcattatccgtcgtctt 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatgaggaatttggtagagaaatgttagctggtataaatcctgtcattatccgtcgtctt 360
Query: 957 gaggaattccctccaaaaagcaagctaaacaacaaacaatatggcaatcaaaacagttca 1016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaggaattccctccaaaaagcaagctaaacaacaaacaatatggcaatcaaaacagttca 420
Query: 1017 ataacagaagatcacataaagaataatctggatggactgacagtagatgaggcattaaag 1076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ataacagaagatcacataaagaataatctggatggactgacagtagatgaggcattaaag 480
Query: 1077 aacaacaagctatacatattagatcaccatgatacagtgatgccatacctaaggcggata 1136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aacaacaagctatacatattagatcaccatgatacagtgatgccatacctaaggcggata 540
Query: 1137 aatgctacctccacaaagacatatgcatcaagaacactgcttttcttg 1184
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aatgctacctccacaaagacatatgcatcaagaacactgcttttcttg 588
>KJC_c08315
Length = 582
Score = 682 bits (344), Expect = 0.0
Identities = 361/364 (99%), Gaps = 2/364 (0%)
Strand = Plus / Plus
Query: 1 agaatggtctgcaagggaaagtaggagaacctgcatatttggaagattggattactacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 agaatggtctgcaagggaaagtaggagaacctgcatatttggaagattggattactacaa 280
Query: 61 tagctcccttgacaccaggagattcagcattcaaagttacatttgattggaatgaggaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 281 tagctcccttgacaccaggagattcagcattcaaagttacatttgattgtaatgaggaaa 340
Query: 121 ttggaattccaggagcattcataattaaaaacaaccatcacagtgaattttacctcaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ttggaattccaggagcattcataattaaaaacaaccatcacagtgaattttacctcaaaa 400
Query: 181 ctctcactcttgaagatgttcctggacaaggtagaatccattttgtatgcaattcatggg 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 401 ctctcactcttgaagatgttcctggacaaggtagaatcca-tttgtatgcaattcatggg 459
Query: 241 tttatcctgccaaacattacaagaaagatcgcattttcttcgctaacaagacatttctgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tttatcctgccaaacattacaagaaagatcgcattttcttcgctaacaagacatttctgc 519
Query: 301 cacatgagacaccaatgcctttgcgcaagtacagagaggaagagctcgagaatttgagag 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 520 cacatgagacaccaatgcctttgcgcaagtacagagagg-agagctcgagaatttgagag 578
Query: 361 gaga 364
||||
Sbjct: 579 gaga 582
>KJC_c05446
Length = 717
Score = 61.9 bits (31), Expect = 3e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 358 gaggagatggaaaaggagagctgcaagaatgggatcgtgtgtatgattatgcttactaca 417
||||| |||||||||| ||||| | || |||||| | |||||||| |||||||||||||
Sbjct: 170 gaggaaatggaaaaggtgagctaaaggagtgggatagagtgtatgactatgcttactaca 111
Query: 418 atgattt 424
|||||||
Sbjct: 110 atgattt 104