Jatropha Genome Database

JcCA0060881.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0060881.10 + phase: 0 /partial
         (279 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c02077                                                            474   e-134

>KJC_c02077 
          Length = 1255

 Score =  474 bits (239), Expect = e-134
 Identities = 239/239 (100%)
 Strand = Plus / Minus

                                                                       
Query: 41  gattgtatctccatgctgtaactgaaacaaagcttgtagttgatacttcaagaggagaaa 100
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 gattgtatctccatgctgtaactgaaacaaagcttgtagttgatacttcaagaggagaaa 841

                                                                       
Query: 101 ctttgcgcatcaattttgatgtaacttttccagccctaccatgttctattctcagccttg 160
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 ctttgcgcatcaattttgatgtaacttttccagccctaccatgttctattctcagccttg 781

                                                                       
Query: 161 atgccatggacatcagtggagagcagcatcttgatgtcaaacacgatataatcaagaaaa 220
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 atgccatggacatcagtggagagcagcatcttgatgtcaaacacgatataatcaagaaaa 721

                                                                      
Query: 221 gactggattctcatggaaatgtaatagaagcacggcaagatggtataggtgctcctaag 279
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 gactggattctcatggaaatgtaatagaagcacggcaagatggtataggtgctcctaag 662