Jatropha Genome Database
- JcCA0046261.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0046261.30 + phase: 0
(1866 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c05333 1491 0.0
KJC_c02538 60 2e-08
>KJC_c05333
Length = 769
Score = 1491 bits (752), Expect = 0.0
Identities = 766/768 (99%), Gaps = 2/768 (0%)
Strand = Plus / Plus
Query: 662 atttcattgaaaagactttgccaatcattcagtggggaaagcgcacaagggtagttttag 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atttcattgaaaagactttgccaatcattcagtggggaaagcgcacaagggtagttttag 60
Query: 722 atgttggttgtggagttgctagcttcggtggctatttgctagagaaagaagttattacca 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgttggttgtggagttgctagcttcggtggctatttgctagagaaagaagttattacca 120
Query: 782 tgtcctttgctccaaaggacgaacatgaagctcagatacaatttgcactggagcgaggaa 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtcctttgctccaaaggacgaacatgaagctcagatacaatttgcactggagcgaggaa 180
Query: 842 ttcctgctatgctttctgtcattggcacacgaaagctgccataccctaacaatgcatttg 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcctgctatgctttctgtcattggcacacgaaagctgccataccctaacaatgcatttg 240
Query: 902 atctaattcattgtgcacgatgcagggttcactgggatggtgatggtggaaaaccactaa 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atctaattcattgtgcacgatgcagggttcactgggatggtgatggtggaaaaccactaa 300
Query: 962 tggagctcaataggatactcaggcctggaggtttctttgtgtggtctgctacgcctgtat 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tggagctcaataggatactcaggcctggaggtttctttgtgtggtctgctacgcctgtat 360
Query: 1022 atcgtgaggatgagaaagatcaaaatgtttggaaatctatggtaattgtgacaagtgcta 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atcgtgaggatgagaaagatcaaaatgtttggaaatctatggtaattgtgacaagtgcta 420
Query: 1082 tatgctggaaggaagtggcaaagactacagattcgacaggaattgggctcgtaatatatc 1141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tatgctggaaggaagtggcaaagactacagattcgacaggaattgggctcgtaatatatc 480
Query: 1142 agaagcctatctcaacttcatgctatgagaatcgccaagtacatgagccacctttgtgtg 1201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agaagcctatctcaacttcatgctatgagaatcgccaagtacatgagccacctttgtgtg 540
Query: 1202 atcaaaacgatatgcaatctgtcccatggaatgagcctctcagtaaatgcatttcaaggc 1261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atcaaaacgatatgcaatctgtcccatggaatgagcctctcagtaaatgcatttcaaggc 600
Query: 1262 ttccagttgatgagagcaatagcctcatcggctggcctgcacgatggcatgata-gaatt 1320
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 601 ttccagttgatgagagcaatagcctcatcggctggcctgcacgatggcatgatacgaatt 660
Query: 1321 ta-cagtgtgcctccaagcctgtcaacccaaccaaatgctataaaaacatttcagagtga 1379
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 taccagtgtgcctccaagcctgtcaacccaaccaaatgctataaaaacatttcagagtga 720
Query: 1380 ttccaaacattggtcgactatcgtatctgatatttatctgaatgcacc 1427
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ttccaaacattggtcgactatcgtatctgatatttatctgaatgcacc 768
>KJC_c02538
Length = 706
Score = 60.0 bits (30), Expect = 2e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 779 ccatgtcctttgctccaaaggacgaacatgaagctcagatacaatttgcactggagcgag 838
||||||||||||| ||| |||| | || ||||| ||||||||||||||| ||||||| |
Sbjct: 307 ccatgtcctttgcaccacgggacaatcacgaagcacagatacaatttgcattggagcggg 366
Query: 839 gaattcctgc 848
|| |||||||
Sbjct: 367 gagttcctgc 376