Jatropha Genome Database
- JcCA0045971.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0045971.30 + phase: 0 /partial
(851 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01705 1398 0.0
KJC_c00757 101 3e-21
KJC_c00060 92 3e-18
KJC_c12645 66 1e-10
KJC_s20547 64 6e-10
KJC_s18211 60 9e-09
KJC_c00662 60 9e-09
KJC_s20380 52 2e-06
>KJC_c01705
Length = 1074
Score = 1398 bits (705), Expect = 0.0
Identities = 733/737 (99%), Gaps = 4/737 (0%)
Strand = Plus / Minus
Query: 112 gtgaggatcaaaattaaatatacttctctttgccatactgatctctacttctgggaagcc 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1074 gtgaggatcaaaattaaatatacttctctttgccatactgatctctacttctgggaagcc 1015
Query: 172 aagggtcagacgccactgtttcctcgtatatttggacatgaagcatctggaattgtagag 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 aagggtcagacgccactgtttcctcgtatatttggacatgaagcatctggaattgtagag 955
Query: 232 agtgtcgggggaggcgtaacagacctcgaggctggggatcatgttcttccagtatttact 291
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 954 agtgtcgggggag-cgtaacagacctcgaggctggggatcatgttcttccagtatttact 896
Query: 292 ggggaatgtggagaatgtgagcactgtaagtctgaggagagtaacatgtgtgacttgctg 351
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 ggggaatgtgg-gaatgtgagcactgtaagtctgaggagagtaacatgtgtgacttgctg 837
Query: 352 agaataaacactgataggggtttcatgcttaatgatggaaagtctcggttctcgattgat 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 agaataaacactgataggggtttcatgcttaatgatggaaagtctcggttctcgattgat 777
Query: 412 ggggtgccaataaaccattttgttggcacttctacatttagtgaatacacagttgttcat 471
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 776 ggggtgccaataa-ccattt-gttggcacttctacatttagtgaatacacagttgttcat 719
Query: 472 agaggatctcttgcaaagatcaatcccttagctcctttggataaagtctgcattcttagt 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 agaggatctcttgcaaagatcaatcccttagctcctttggataaagtctgcattcttagt 659
Query: 532 tgtggtatctcaacaggacttggtgcgacattgaatgtggctaaaccaaagaaaggttcc 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 tgtggtatctcaacaggacttggtgcgacattgaatgtggctaaaccaaagaaaggttcc 599
Query: 592 tcagttgctgttttcggattaggagctgtaggcctagcagctgcagaaggtgcaagaatt 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 tcagttgctgttttcggattaggagctgtaggcctagcagctgcagaaggtgcaagaatt 539
Query: 652 gctggagcatctaggatcattggggtggatttgaacccaaagaggtttgaagaagccaag 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gctggagcatctaggatcattggggtggatttgaacccaaagaggtttgaagaagccaag 479
Query: 712 aagtttggagtaactgaatttgtgaacccgaaggatcatgaccgtccagttcaacagata 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 aagtttggagtaactgaatttgtgaacccgaaggatcatgaccgtccagttcaacagata 419
Query: 772 attgcagagatgacaaatggtggagtagacaggagtgtggagtgcacagggcacattgac 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 attgcagagatgacaaatggtggagtagacaggagtgtggagtgcacagggcacattgac 359
Query: 832 gccatggttgcagcttt 848
|||||||||||||||||
Sbjct: 358 gccatggttgcagcttt 342
>KJC_c00757
Length = 826
Score = 101 bits (51), Expect = 3e-21
Identities = 201/251 (80%)
Strand = Plus / Minus
Query: 490 atcaatcccttagctcctttggataaagtctgcattcttagttgtggtatctcaacagga 549
|||||||| || |||||| | || |||||||| |||| |||||||| ||||| |||||
Sbjct: 301 atcaatcctttggctcctcttgacaaagtctgtgttctaagttgtggaatctccacaggt 242
Query: 550 cttggtgcgacattgaatgtggctaaaccaaagaaaggttcctcagttgctgttttcgga 609
|||||||| || | ||||| ||||| || |||||||| | |||||| |||| |||
Sbjct: 241 cttggtgccactcttaatgttgctaagcctccaaaaggttcaactgttgctatttttgga 182
Query: 610 ttaggagctgtaggcctagcagctgcagaaggtgcaagaattgctggagcatctaggatc 669
|| ||||||||||| || || ||||| ||||| || || |||||||| || || || ||
Sbjct: 181 ttgggagctgtaggtcttgctgctgctgaaggggctaggattgctggggcttcaagaata 122
Query: 670 attggggtggatttgaacccaaagaggtttgaagaagccaagaagtttggagtaactgaa 729
||||| || ||| |||| ||| || ||||||||||| ||||| ||||||||||||||
Sbjct: 121 attggtgttgatctgaattcaagtagatttgaagaagcaaagaaatttggagtaactgag 62
Query: 730 tttgtgaaccc 740
|||||||||||
Sbjct: 61 tttgtgaaccc 51
Score = 60.0 bits (30), Expect = 9e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 25 attccctgcaaagctgcggtggcatgggaggcaggcaagccattggtgat 74
|||| |||||||||||| |||||||||||||| || |||||||| |||||
Sbjct: 766 attcactgcaaagctgctgtggcatgggaggctgggaagccattagtgat 717
>KJC_c00060
Length = 1411
Score = 91.7 bits (46), Expect = 3e-18
Identities = 229/290 (78%)
Strand = Plus / Plus
Query: 529 agttgtggtatctcaacaggacttggtgcgacattgaatgtggctaaaccaaagaaaggt 588
|||||||| ||||| ||||| |||||||| || ||||| || || ||||| || || |||
Sbjct: 603 agttgtggaatctctacaggtcttggtgccactttgaacgttgcgaaacccaaaaagggt 662
Query: 589 tcctcagttgctgttttcggattaggagctgtaggcctagcagctgcagaaggtgcaaga 648
|| ||||| |||| ||||| || ||||| ||||| || ||||||||||| ||||||
Sbjct: 663 cagtctgttgcaatttttggattgggcgctgttggccttgctgctgcagaaggggcaaga 722
Query: 649 attgctggagcatctaggatcattggggtggatttgaacccaaagaggtttgaagaagcc 708
|| ||||||| || ||||| || || || |||||||| | | | |||||||| |||
Sbjct: 723 atgtctggagcttcaaggataatcggtgtagatttgaatgccagtcgatttgaagatgcc 782
Query: 709 aagaagtttggagtaactgaatttgtgaacccgaaggatcatgaccgtccagttcaacag 768
||||||||||| || ||||| |||||||| || || ||||||||| || |||||||||
Sbjct: 783 aagaagtttggtgttactgagtttgtgaatccaaaagatcatgacaagcctgttcaacag 842
Query: 769 ataattgcagagatgacaaatggtggagtagacaggagtgtggagtgcac 818
||||||| || ||||| |||| ||||| || |||| ||||| |||||
Sbjct: 843 gtaattgctgaaatgactgatgggggagttgatcggagcgtggaatgcac 892
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 31 tgcaaagctgcggtggcatgggaggcaggcaagccattggtgatcgagcaagtggaggta 90
|||||||| |||||||||||||||||||| || ||| ||||||| || ||||||||||
Sbjct: 105 tgcaaagccgcggtggcatgggaggcagggaaaccactggtgattgaagaagtggaggtg 164
Query: 91 gctccacc 98
|| |||||
Sbjct: 165 gcaccacc 172
>KJC_c12645
Length = 484
Score = 65.9 bits (33), Expect = 1e-10
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 697 tttgaagaagccaagaagtttggagtaactgaatttgtgaacccgaaggatcatgaccgt 756
|||||||| |||||||||||||| || ||||| |||||||| || || |||||||||
Sbjct: 385 tttgaagatgccaagaagtttggtgttactgagtttgtgaatccaaaagatcatgacaag 444
Query: 757 ccagttcaacagataattgcagagatgac 785
|| ||||||||| ||||||| || |||||
Sbjct: 445 cctgttcaacaggtaattgctgaaatgac 473
>KJC_s20547
Length = 248
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 31 tgcaaagctgcggtggcatgggaggcaggcaagccattggtgatcgagcaagtggaggta 90
|||||||| |||||||||||||||||||| || ||| ||||||| || ||||||||||
Sbjct: 93 tgcaaagccgcggtggcatgggaggcagggaaaccactggtgattgaagaagtggaggtg 152
Query: 91 gctccacc 98
|| |||||
Sbjct: 153 gcaccacc 160
>KJC_s18211
Length = 516
Score = 60.0 bits (30), Expect = 9e-09
Identities = 126/158 (79%)
Strand = Plus / Minus
Query: 529 agttgtggtatctcaacaggacttggtgcgacattgaatgtggctaaaccaaagaaaggt 588
|||||||| ||||| ||||| |||||||| || ||||| || || ||||| || || |||
Sbjct: 339 agttgtggaatctctacaggtcttggtgccactttgaacgttgcgaaacccaaaaagggt 280
Query: 589 tcctcagttgctgttttcggattaggagctgtaggcctagcagctgcagaaggtgcaaga 648
|| ||||| |||| ||||| || ||||| ||||| || ||||||||||| ||||||
Sbjct: 279 cagtctgttgcaatttttggattgggcgctgttggccttgctgctgcagaaggggcaaga 220
Query: 649 attgctggagcatctaggatcattggggtggatttgaa 686
|| ||||||| || ||||| || || || ||||||||
Sbjct: 219 atgtctggagcttcaaggataatcggtgtagatttgaa 182
>KJC_c00662
Length = 1402
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 715 tttggagtaactgaatttgtgaacccgaaggatcatga 752
|||||||| |||||||||||||| ||||||||||||||
Sbjct: 611 tttggagttactgaatttgtgaatccgaaggatcatga 574
>KJC_s20380
Length = 210
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 268 gatcatgttcttccagtatttactggggaatgtggagaatgtgagcactgtaagtctgag 327
|||||||| ||||| ||||||||||| |||||| ||||||| |||||||| || ||
Sbjct: 119 gatcatgtccttcctgtatttactggagaatgtaaggaatgtgctcactgtaattccgaa 178
Query: 328 gagagtaacatgtg 341
||||| ||||||||
Sbjct: 179 gagagcaacatgtg 192