Jatropha Genome Database
- JcCA0045701.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0045701.10 - phase: 0
(744 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c08164 1378 0.0
KJC_c02649 400 e-111
KJC_c04690 92 2e-18
>KJC_c08164
Length = 1275
Score = 1378 bits (695), Expect = 0.0
Identities = 727/735 (98%), Gaps = 2/735 (0%)
Strand = Plus / Minus
Query: 12 gggctctaagccacctccactggagattgcaggcactccaacaaacatcagtgcatgttc 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 gggctctaagccacctccactggagattgcaggcactccaacaaacatcagtgcatgttc 965
Query: 72 ctctattcaacctagcccacaatcctcaaatttccctagtcctgttccttcctaccatgt 131
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 ctctattcaacctagcccacaatcctcaaatttccctagtcctgttccttcctaccatgc 905
Query: 132 cagtccaacatcctcttcatttccgagccctactcgtttcgacgcaaatccttccacata 191
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 904 cagtccaacatcctcttcatttccgagccctactcgtttcgatgcaaatccttccacata 845
Query: 192 ccttctccctttcctccgtaacatagcttcgatccctgcaaacctccctcagcttagaat 251
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 844 ccttctccctttcctccgtaacatagcttcaatccctgcgaacctccctcagcttagaat 785
Query: 252 atccaatagtgctcctgtaactccaccgctttcttcccctactaatagaagttcaaagag 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 atccaatagtgctcctgtaactccaccgctttcttcccctactaatagaagttcaaagag 725
Query: 312 gaaagctgattgggaatccttttcaaatggaccactaaactcctttcgccatcccct-tt 370
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 724 gaaagctgattgggaatccttttcaaatggatcactaaactcctttcgccatcccctttt 665
Query: 371 ttcctgtctctgccccttcaagccctacacgacgccagcatcttacaccagctactatac 430
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 ttgctgtctctgccccttcaagccctacacgacgccagcatcttacaccagctactatac 605
Query: 431 cagaatgtgatgaatcggatgcctcaactgttgattctggtcgctgggtgagttttcagg 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 cagaatgtgatgaatcggatgcctcaactgttgattctggtcgctgggtgagttttcagg 545
Query: 491 ctgttgctcctcaagtagctcctccttcaccgacgtttaatcttgtcaaaccaattggtc 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ctgttgctcctcaagtagctcctccttcaccgacgtttaatcttgtcaaaccaattggtc 485
Query: 551 agcagagtatgtttcaggatggaattgatcatgggcatggagga-tttggttggggggca 609
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 484 agcagagtatgtttcaggatggaattgatcatgggcatggaggagtttggttggggggca 425
Query: 610 ggtgcagagaggggaagagggtcagagtttgaatttgagaatggcagggtgaagccatgg 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ggtgcagagaggggaagagggtcagagtttgaatttgagaatggcagggtgaagccatgg 365
Query: 670 gaaggtgagaggatccatgaaataggagtggatgatctcgagctcacacttgggagcgca 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gaaggtgagaggatccatgaaataggagtggatgatctcgagctcacacttgggagcgca 305
Query: 730 aaggctcatggttaa 744
|||||||||||||||
Sbjct: 304 aaggctcatggttaa 290
>KJC_c02649
Length = 1095
Score = 400 bits (202), Expect = e-111
Identities = 208/210 (99%)
Strand = Plus / Plus
Query: 237 ccctcagcttagaatatccaatagtgctcctgtaactccaccgctttcttcccctactaa 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 ccctcagcttagaatatccaatagtgctcctgtaactccaccgctttcttcccctactaa 945
Query: 297 tagaagttcaaagaggaaagctgattgggaatccttttcaaatggaccactaaactcctt 356
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 946 tagaagttcaaagaggaaagctgattgggaatccttttcaaatggatcactaaactcctt 1005
Query: 357 tcgccatcccctttttcctgtctctgccccttcaagccctacacgacgccagcatcttac 416
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1006 tcgccatcccctttttgctgtctctgccccttcaagccctacacgacgccagcatcttac 1065
Query: 417 accagctactataccagaatgtgatgaatc 446
||||||||||||||||||||||||||||||
Sbjct: 1066 accagctactataccagaatgtgatgaatc 1095
>KJC_c04690
Length = 625
Score = 91.7 bits (46), Expect = 2e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 657 ggtgaagccatgggaaggtgagaggatccatgaaataggagtggatgatctcgagctcac 716
|||||||||||||||||| |||||||| |||||||||||| ||||||| || ||||||||
Sbjct: 198 ggtgaagccatgggaaggagagaggattcatgaaataggattggatgacctagagctcac 257
Query: 717 acttgg 722
||||||
Sbjct: 258 acttgg 263