Jatropha Genome Database
- JcCA0044701.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0044701.10 + phase: 0 /pseudo/partial
(2199 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02399 918 0.0
KJC_c05446 351 5e-96
KJC_c07406 90 3e-17
KJC_c01773 68 1e-10
>KJC_c02399
Length = 707
Score = 918 bits (463), Expect = 0.0
Identities = 470/471 (99%), Gaps = 1/471 (0%)
Strand = Plus / Plus
Query: 211 atgactatgcttactacaatgatttgggaagtccagacaagggaaaagaatatgctcgcc 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgactatgcttactacaatgatttgggaagtccagacaagggaaaagaatatgctcgcc 60
Query: 271 ctgttcttggtggaccaggaaagtatccatatcctcgaagaggaagaactggtcggaaac 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgttcttggtggaccaggaaagtatccatatcctcgaagaggaagaactggtcggaaac 120
Query: 331 caacaaaaacagaccctgattctgagagcagattgcctcttctgagtctagatatctatg 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caacaaaaacagaccctgattctgagagcagattgcctcttctgagtctagatatctatg 180
Query: 391 ttcctagagacgaacggtttggtcacctgaaattttcagattttcttgcctatgctctga 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcctagagacgaacggtttggtcacctgaaattttcagattttcttgcctatgctctga 240
Query: 451 agtcattagttcaggtattactgccagaggttaaatccttatgtgacaagactataaatg 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agtcattagttcaggtattactgccagaggttaaatccttatgtgacaagactataaatg 300
Query: 511 aatttgattcctttgaagatgttcttaagctctatgaagggggtcttaagcttccaaatg 570
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 301 aatttgattcctttgaagatgttcttaagctctatgaa-ggggtcttaagcttccaaatg 359
Query: 571 cggctttaaccagtaaaatacggaagagcatcccatgggagatgctcaaagaacttgttc 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 cggctttaaccagtaaaatacggaagagcatcccatgggagatgctcaaagaacttgttc 419
Query: 631 gtaatgatggtgagagattcctcaaattcccaatgcctgatgtaatcaaag 681
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gtaatgatggtgagagattcctcaaattcccaatgcctgatgtaatcaaag 470
Score = 373 bits (188), Expect = e-102
Identities = 195/196 (99%), Gaps = 1/196 (0%)
Strand = Plus / Plus
Query: 725 agcggacaagtctgcgtggaggacagatgaagagtttgcacgagaaatgctcgccggagt 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 agcggacaagtctgcgtggaggacagatgaagagtttgcacgagaaatgctcgccggagt 528
Query: 785 caatccagtcatcatcagtcttctccgagagtttcctccaaccagcaagctagaccctaa 844
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 529 caatccagtcatcatcagtcttctccgagagtttcctccaaccagcaagctagaccct-a 587
Query: 845 agaatttggaaaccagaacagtacaataaggaaagagcacatagaagggaacatgaatgg 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 agaatttggaaaccagaacagtacaataaggaaagagcacatagaagggaacatgaatgg 647
Query: 905 tctcacagtagatcaa 920
||||||||||||||||
Sbjct: 648 tctcacagtagatcaa 663
>KJC_c05446
Length = 717
Score = 351 bits (177), Expect = 5e-96
Identities = 229/239 (95%), Gaps = 8/239 (3%)
Strand = Plus / Minus
Query: 100 agacctaccttccatgccagacgcctgagtccttacgcaaatatagagaagaagaactta 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 agacctaccttccatgccagacgcctgagtccttacgcaaatatagagaagaagaactta 180
Query: 160 taaatctgcgaggaaatggaaaaggtgagctaaaggagtgggatagagtgtatgactatg 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 taaatctgcgaggaaatggaaaaggtgagctaaaggagtgggatagagtgtatgactatg 120
Query: 220 cttactacaatga-tttgggaagt--ccag-ac-aaggg-aaaag--aatatgctcgccc 271
||||||||||||| |||||||||| | || || ||||| ||||| | |||||||||||
Sbjct: 119 cttactacaatgattttgggaagttcctagtactaagggtaaaagtaattatgctcgccc 60
Query: 272 tgttcttggtggaccaggaaagtatccatatcctcgaagaggaagaactggtcggaaac 330
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 tgttcttggtggaccaggaaagtatccatatcctcgaagaggaagaactggtcggaaac 1
>KJC_c07406
Length = 498
Score = 89.7 bits (45), Expect = 3e-17
Identities = 153/189 (80%)
Strand = Plus / Minus
Query: 1599 tgaacttcagtcgtggtggacagagatccgcaatgtaggccatggtgacaagaaggatga 1658
|||||||||||| ||||||| ||| ||||| | |||||||||||||||||||| || ||
Sbjct: 436 tgaacttcagtcatggtggaaagaaatccgtgaagtaggccatggtgacaagaaagaaga 377
Query: 1659 accatggtggcctgagatgcagacacgagctgatcttaagcaaacatgcactataatcat 1718
|| |||||||| ||||||| ||| ||| || || | || |||||||||| |||||
Sbjct: 376 gccttggtggcccaagatgcatacaagagaagagctaatagaatcatgcactattatcat 317
Query: 1719 atggatagcttcagcgcttcatgcagctgttaactttgggcaatacccatatgctggcta 1778
|||||||| || || ||||||||||| | |||||||| ||||| || |||| |||||
Sbjct: 316 ttggatagcatctgctcttcatgcagcaatcaactttggtcaatatccttatggaggcta 257
Query: 1779 cctccctaa 1787
||| |||||
Sbjct: 256 ccttcctaa 248
>KJC_c01773
Length = 1082
Score = 67.9 bits (34), Expect = 1e-10
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 1225 agtgttcttcacccaatatataaacttctgcatccccacttccgcgatacaatgaacata 1284
||||| ||||| |||||| | |||||||| ||||| |||||||| || || |||||||||
Sbjct: 832 agtgtgcttcatccaatacacaaacttctacatcctcacttccgtgacacgatgaacata 891
Query: 1285 aatgccttggctaggcagattctcatcaatgctggtgg 1322
||||| | ||||| ||||| || || |||||||||||
Sbjct: 892 aatgcagttgctagacagatacttattaatgctggtgg 929