Jatropha Genome Database
- JcCA0044421.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0044421.10 + phase: 0
(1686 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03917 252 2e-66
>KJC_c03917
Length = 827
Score = 252 bits (127), Expect = 2e-66
Identities = 413/507 (81%), Gaps = 1/507 (0%)
Strand = Plus / Plus
Query: 938 gaattgtgaaacgtctacatgccttaagctttcacttgaggagttattattggatcgact 997
||||||| |||||| |||||||||| |||| |||| || | ||||| | |||| | || |
Sbjct: 298 gaattgttaaacgtttacatgccttgagctatcacatgcgaagttacttttggttagatt 357
Query: 998 tgaagcagcttaatgatatatatcggtataaaacagaggaatactcgcatactgcagtta 1057
| | || || ||||| ||||| | |||||||| ||||| ||||| || |||||||| |
Sbjct: 358 ttcaacaactaaatgacatatacagatataaaactgaggagtactcacacactgcagtaa 417
Query: 1058 acaagtttaatgtaatacccgattctcttccagaatggatttttgattttatgccaactc 1117
| ||||||||||| || || ||||| |||| || ||| | ||||| ||||||||||| |
Sbjct: 418 ataagtttaatgtcattcctgattcaattccggattgggtatttgactttatgccaaccc 477
Query: 1118 gtgggggttactttattggcaatgttagtcctgcaagaatggactttcgttggttttgtt 1177
|||| ||||| |||||||||||||||||||||||||| ||||| ||||| |||||| ||
Sbjct: 478 gtggtggttattttattggcaatgttagtcctgcaaggatggattttcgatggtttgctt 537
Query: 1178 taggtaattgtgttgcaattctttcatccttggcaacccctgaacaatctatggcaatca 1237
|||| ||||||||||| ||||| ||||| | ||||| ||||| ||||| ||||| ||||
Sbjct: 538 taggaaattgtgttgccattctctcatctcttgcaactcctgagcaatcaatggctatca 597
Query: 1238 tggatctcatagaatcgcggtgggaagagttggtcggagaaatgccactcaaggtatgct 1297
||||||| || ||| | || ||||| ||| |||| ||||||||||| | || || |
Sbjct: 598 tggatcttattgaagctcgctgggaggagctggttggagaaatgcctttgaaaatagctt 657
Query: 1298 atccagccatagagagccatgaatggcgaattacaactggatgtgatcccaaaaacacca 1357
|||| || ||||| || ||||||||||||||| |||||| || |||||||| || ||||
Sbjct: 658 atcctgcaatagaaagtcatgaatggcgaattgtaactggttgcgatcccaagaatacca 717
Query: 1358 gatggagttatcacaatggaggatcttggccagttcttctatggcttctcacagctgcat 1417
|||||||||| || |||||||||||||||||||| ||| ||||||| || || || ||||
Sbjct: 718 gatggagttaccataatggaggatcttggccagtgcttttatggctgctaactgccgcat 777
Query: 1418 gtatcaagactggacgcccccaaattg 1444
| || || |||||||| || |||||||
Sbjct: 778 gcattaa-actggacgaccacaaattg 803
Score = 87.7 bits (44), Expect = 8e-17
Identities = 83/96 (86%)
Strand = Plus / Plus
Query: 766 gagggctttgacacattcccaactcttctttgtgctgatggatgctgcatgattgatcgt 825
||||| ||||| |||||||| |||||||||||||||||||| |||| |||||||||||
Sbjct: 127 gagggatttgatacattcccgactcttctttgtgctgatggttgctctatgattgatcgc 186
Query: 826 aggatgggtgtttatgggtatccaattgaaattcaa 861
|| ||||| |||| || ||||| ||||||||||||
Sbjct: 187 agaatgggcatttacggttatcctattgaaattcaa 222