Jatropha Genome Database
- JcCA0044211.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0044211.10 + phase: 1 /partial
(4526 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c06022 331 9e-90
>KJC_c06022
Length = 927
Score = 331 bits (167), Expect = 9e-90
Identities = 347/405 (85%), Gaps = 4/405 (0%)
Strand = Plus / Minus
Query: 1552 aaattgagtttgttacaaaatataggcctcaaaaatataagggttgcattctcaagctca 1611
|||||||||||||||||||| || |||| | || ||||||||| |||||||| ||||
Sbjct: 527 aaattgagtttgttacaaaacgtatgccttacaattataagggtcatattctcaacctca 468
Query: 1612 tgtctggattagatttgtcggaaaataaattaacaggtgagattccattcgagctaggga 1671
|||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||
Sbjct: 467 tgtctggattagatttgtcgcaaaataaactaacaggtgagattccatttgagctaggga 408
Query: 1672 agctatatgagattcattccttaaacttatcgcataatcagttgataggatcgattccaa 1731
|||||| | |||||||| |||| |||||||| ||||||| |||||||||||||||||
Sbjct: 407 agctatttcagattcat-ccttgaacttatcctataatcaattgataggatcgattccgg 349
Query: 1732 caacattctcaaatctttcagcattggagagcttagacttgtcttataataatctaagtg 1791
||||||||| ||||| ||||||| |||||||||||||||||||||||| || ||||||
Sbjct: 348 aaacattctcgaatctcacagcattagagagcttagacttgtcttataatcatttaagtg 289
Query: 1792 gagagattccttataacttaatagatctacactccctaggagtgttctctgtggcttaca 1851
|||||||||||| | ||||||||||| |||| ||||| |||||| |||||||||| |
Sbjct: 288 gagagattcctttcagtttaatagatctccacttcctagaggtgttcactgtggcttata 229
Query: 1852 acaacttatcaggcaggattcctgac---caaccacaactcagtactttcgacaatagaa 1908
| |||||||||||||||||||| ||| | | ||| ||||||||||||||||||| |
Sbjct: 228 ataacttatcaggcaggattccagacatgaaggcgcaattcagtactttcgacaatagca 169
Query: 1909 gctttgaaggcaacccatttctctccggacttcaaatggggaaaa 1953
||| ||||||| |||||||||| ||||| ||| || |||||||
Sbjct: 168 gctaccaaggcaatccatttctctgcggacctcagatagggaaaa 124
Score = 285 bits (144), Expect = 5e-76
Identities = 198/216 (91%)
Strand = Plus / Minus
Query: 1203 aacttgaaagataacagactctcaggcagcgttcccaataactttggttcatttccaaaa 1262
||||||||||||||||| ||| |||||||| |||||||||| || ||| |||||||||||
Sbjct: 871 aacttgaaagataacagcctcgcaggcagcattcccaataaattcggtacatttccaaaa 812
Query: 1263 ttacgggctcttctattggggggaaactatttaaatggtttcattccgagttggctgtgc 1322
|||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||
Sbjct: 811 ttacgggctcttctattgggaggaaattatttaaatggtttcattccgaattggctgtgt 752
Query: 1323 gaactaaatgaagtcagcttattagatctttcaagaaactctttttctggctccataccc 1382
||||||||||| ||| ||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 751 gaactaaatgagctcaacttcttagatctttcaagaaactctttttctggctctataccc 692
Query: 1383 aactgtttatataatctatcatttggaaggacgaaa 1418
||||||||||| ||||| || |||||||||||||||
Sbjct: 691 aactgtttatacaatctctcctttggaaggacgaaa 656