Jatropha Genome Database
- JcCA0043881.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0043881.10 + phase: 0
(945 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01918 1225 0.0
KJC_c04325 856 0.0
KJC_s20066 389 e-108
KJC_c02107 145 2e-34
>KJC_c01918
Length = 1995
Score = 1225 bits (618), Expect = 0.0
Identities = 651/657 (99%), Gaps = 5/657 (0%)
Strand = Plus / Minus
Query: 285 ttttgaaaagccacttattggtttagagaagaagattatcgatgtgcggaagatggcaaa 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1767 ttttgaaaagccacttattggtttagagaagaagattatcgatgtgcggaagatggcaaa 1708
Query: 345 tgaaactggtttagacttcactgatcagattatttcactagagaataaatatcaacaggc 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1707 tgaaactggtttagacttcactgatcagattatttcactagagaataaatatcaacaggc 1648
Query: 405 tctaaaggatttgtatacacatttgaccccgatacaacgtgtgaatattgcacggcaccc 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1647 tctaaaggatttgtatacacatttgaccccgatacaacgtgtgaatattgcacggcaccc 1588
Query: 465 taacaggcccactttccttgatcatgtatttagcattaccgataagtttgtggaacttca 524
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1587 taacaggcc-actttccttgatcatgtatttagcattaccgataagtttgtggaacttca 1529
Query: 525 cggagatcgagcgggttatgatgatcctgctatcgttactggtataggaaccatagatgg 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1528 cggagatcgagcgggttatgatgatcctgctatcgttactggtataggaaccatagatgg 1469
Query: 585 tagaagatacatgttcatgggtcaccagaagggtagaaacaccaaagagaacattatgcg 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1468 tagaagatacatgttcatgggtcaccagaagggtagaaacaccaaagagaacattatgcg 1409
Query: 645 caattttgggatgcctactccccacggataccggaaggctctaaggatgatgtattacgc 704
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1408 caattttgggatgcctact-cccacggataccggaaggctctaaggatgatgtattacgc 1350
Query: 705 agaccaccatggatttcctatagttacttttattgacacacccggggcatttgcagacct 764
|||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 1349 agaccaccatggatttcctatagttacttt--atgacacaccc-gggcatttgcagacct 1293
Query: 765 caaatctgaagaactaggccagggtgaagcaattgcccataatttgaggacaatgtttgg 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1292 caaatctgaagaactaggccagggtgaagcaattgcccataatttgaggacaatgtttgg 1233
Query: 825 tttaaaggtaccaattgtgtcgattgttattggggaaggtggctctggtggtgctctggc 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1232 tttaaaggtaccaattgtgtcgattgttattggggaaggtggctctggtggtgctctggc 1173
Query: 885 cattggctgtgctaataaattgttaatgcttgaaaatgcagttttctatgttgccag 941
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1172 cattggctgtgctaataaattgttaatgcttgaaaatgcagttttctatgttgccag 1116
>KJC_c04325
Length = 561
Score = 856 bits (432), Expect = 0.0
Identities = 432/432 (100%)
Strand = Plus / Plus
Query: 1 atggcttctatatcgcattccccatctgcatttcgtggaacttcagcttcagatcttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 atggcttctatatcgcattccccatctgcatttcgtggaacttcagcttcagatcttctt 189
Query: 61 aggagctccagcaatggagtttctggtatccctttgaggacattgggaagagcacgattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 aggagctccagcaatggagtttctggtatccctttgaggacattgggaagagcacgattt 249
Query: 121 agctccaagacgaaggattttgcagtgattgctaagattaggaaggtgaagaagcaagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 agctccaagacgaaggattttgcagtgattgctaagattaggaaggtgaagaagcaagaa 309
Query: 181 tatccttggccagataatccggatccaaatgtagcaggaggagtgctctctcatctttcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tatccttggccagataatccggatccaaatgtagcaggaggagtgctctctcatctttcg 369
Query: 241 ccttttaagcctttaaaagagaagccaaagccagttactttggattttgaaaagccactt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ccttttaagcctttaaaagagaagccaaagccagttactttggattttgaaaagccactt 429
Query: 301 attggtttagagaagaagattatcgatgtgcggaagatggcaaatgaaactggtttagac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 attggtttagagaagaagattatcgatgtgcggaagatggcaaatgaaactggtttagac 489
Query: 361 ttcactgatcagattatttcactagagaataaatatcaacaggctctaaaggatttgtat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ttcactgatcagattatttcactagagaataaatatcaacaggctctaaaggatttgtat 549
Query: 421 acacatttgacc 432
||||||||||||
Sbjct: 550 acacatttgacc 561
>KJC_s20066
Length = 378
Score = 389 bits (196), Expect = e-108
Identities = 203/204 (99%), Gaps = 1/204 (0%)
Strand = Plus / Plus
Query: 1 atggcttctatatcgcattccccatctgcatttcgtggaacttcagcttcagatcttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 atggcttctatatcgcattccccatctgcatttcgtggaacttcagcttcagatcttctt 235
Query: 61 aggagctccagcaatggagtttctggtatccctttgaggacattgggaagagcacgattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 aggagctccagcaatggagtttctggtatccctttgaggacattgggaagagcacgattt 295
Query: 121 agctccaagacgaaggattttgcagtgattgctaagattaggaaggtgaagaagcaagaa 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 agctccaagacgaagga-tttgcagtgattgctaagattaggaaggtgaagaagcaagaa 354
Query: 181 tatccttggccagataatccggat 204
||||||||||||||||||||||||
Sbjct: 355 tatccttggccagataatccggat 378
>KJC_c02107
Length = 1326
Score = 145 bits (73), Expect = 2e-34
Identities = 278/345 (80%), Gaps = 1/345 (0%)
Strand = Plus / Plus
Query: 481 cttgatcatgtatttagcattaccgataagtttgtggaacttcacggagatcgagcgggt 540
|||||||||||||| | || ||||| |||| ||||||||||| ||||| || || |||
Sbjct: 404 cttgatcatgtattaaatatcaccgaaaagtgggtggaacttcatggagaccgtgcaggt 463
Query: 541 tatgatgatcctgctatcgttactggtataggaaccatagatggtagaagatacatgttc 600
||||||||||| ||||| || |||||||| ||||| |||||||||| | |||| ||||||
Sbjct: 464 tatgatgatccagctattgtgactggtattggaactatagatggtaaacgatatatgttc 523
Query: 601 atgggtcaccagaag-ggtagaaacaccaaagagaacattatgcgcaattttgggatgcc 659
|| || || || || ||| | |||||||| ||||| ||| ||||| |||| |||||
Sbjct: 524 ataggccatcaaaaaaggtcggaacaccaaggagaatattgctcgcaactttgctatgcc 583
Query: 660 tactccccacggataccggaaggctctaaggatgatgtattacgcagaccaccatggatt 719
||||| ||||| ||||| ||||| | | |||||| | || || || || ||| | ||
Sbjct: 584 aactcctcacggctaccgaaaggccttgcgtatgatgaaatatgctgatcatcatagttt 643
Query: 720 tcctatagttacttttattgacacacccggggcatttgcagacctcaaatctgaagaact 779
||| || ||||||||| ||||||| || ||||| ||||| || |||||||| || |||||
Sbjct: 644 tcccattgttacttttgttgacactcctggggcctttgctgatctcaaatcagaggaact 703
Query: 780 aggccagggtgaagcaattgcccataatttgaggacaatgtttgg 824
|| |||||||||||||| || |||||| ||||||||||||||||
Sbjct: 704 tggtcagggtgaagcaatagctcataatctgaggacaatgtttgg 748