Jatropha Genome Database

JcCA0043071.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0043071.10 + phase: 0 /partial
         (774 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c01603                                                            466   e-131

>KJC_c01603 
          Length = 820

 Score =  466 bits (235), Expect = e-131
 Identities = 235/235 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   actgtccttacaaggcgaaatagcataactggagttgcttacaaagatgagccaacaata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 actgtccttacaaggcgaaatagcataactggagttgcttacaaagatgagccaacaata 645

                                                                       
Query: 61  atggcttgggagcttatgaatgagcccagatgcacttcagatccttctggaaggaccatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 atggcttgggagcttatgaatgagcccagatgcacttcagatccttctggaaggaccatt 705

                                                                       
Query: 121 caggcttggattgcagagatggcttcttatttgaaatccatagatggcaaccacttatta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 caggcttggattgcagagatggcttcttatttgaaatccatagatggcaaccacttatta 765

                                                                  
Query: 181 gaagcaggattggaagggttttacggaccaacatcatcttcaaaacagcaatata 235
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 gaagcaggattggaagggttttacggaccaacatcatcttcaaaacagcaatata 820