Jatropha Genome Database
- JcCA0043061.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0043061.10 - phase: 0 /partial
(1019 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01645 1925 0.0
KJC_c03521 383 e-106
KJC_c09678 82 3e-15
>KJC_c01645
Length = 1046
Score = 1925 bits (971), Expect = 0.0
Identities = 1000/1006 (99%), Gaps = 3/1006 (0%)
Strand = Plus / Minus
Query: 1 atggtgaagatctgttgcattggagcaggatatgtcggtgggcctacaatggcagtcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1004 atggtgaagatctgttgcattggagcaggatatgtcggtgggcctacaatggcagtcatt 945
Query: 61 gcactcaagtgtccgtcgattgaagtagctgttgttgatatctctcaacataggattaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 944 gcactcaagtgtccgtcgattgaagtagctgttgttgatatctctcaacataggattaat 885
Query: 121 gcctggaacagtgaccagctgcccatttatgagccaggccttgatgacgtggtgaagcgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 gcctggaacagtgaccagctgcccatttatgagccaggccttgatgacgtggtgaagcgg 825
Query: 181 tgccgaggcaggaacctcttcttcagcgttgatgtggagaaacatgtctctgaggctgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 tgccgaggcaggaacctcttcttcagcgttgatgtggagaaacatgtctctgaggctgat 765
Query: 241 atagtcttcgtttctgtcaacactccgaccaaaactcgcggactgggggctggtaaagct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 atagtcttcgtttctgtcaacactccgaccaaaactcgcggactgggggctggtaaagct 705
Query: 301 gctgatctgacatactgggagagtgcagcgcgtatgattgctgatgtctcaaagtcaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 gctgatctgacatactgggagagtgcagcgcgtatgattgctgatgtctcaaagtcaaac 645
Query: 361 aaaattgtggttgagaaatcaactgtcccagttaagacggcagaggcaattgaaaaaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 aaaattgtggttgagaaatcaactgtcccagttaagacggcagaggcaattgaaaaaatt 585
Query: 421 ttgacccacaacagcaaggggatcaaattccagatcctctcaaacccagagttccttgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ttgacccacaacagcaaggggatcaaattccagatcctctcaaacccagagttccttgct 525
Query: 481 gagggaactgcaatcagcgatctgtttaacccagatagagttcttattggaggaagggaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 gagggaactgcaatcagcgatctgtttaacccagatagagttcttattggaggaagggaa 465
Query: 541 accccagaaggtcaagaagccatcaaagcattgaaggatgtttatgctcattgggtacct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 accccagaaggtcaagaagccatcaaagcattgaaggatgtttatgctcattgggtacct 405
Query: 601 gaagatcgcattctaaccaccaacctttggtccgcagagctgtccaagcttgcagccaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gaagatcgcattctaaccaccaacctttggtccgcagagctgtccaagcttgcagccaat 345
Query: 661 gccttcttggcccagaggatctcatccgttaatgctatgtctgcactatgtgaggcaact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gccttcttggcccagaggatctcatccgttaatgctatgtctgcactatgtgaggcaact 285
Query: 721 ggggcagatgttaccgaggtttcatatgctgttggcaaggacactagaattggtcccaag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ggggcagatgttaccgaggtttcatatgctgttggcaaggacactagaattggtcccaag 225
Query: 781 tttttgaatgctagcgttggttttggtgggtcctgcttccagaaggacattttgaacctt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 tttttgaatgctagcgttggttttggtgggtcctgcttccagaaggacattttgaacctt 165
Query: 841 gtatacatctgcgagtgcaatggccttccagatgtggcagagtattggaaacaagtaatc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 gtatacatctgcgagtgcaatggccttccagatgtggcagagtattggaaacaagtaatc 105
Query: 901 aagatcaatgattatcaaaagaaccgattcgtgaaccgtg-ttgtttcctctatgtttaa 959
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 104 aagatcaatgattatcaaaag-accgattcgtgaaccgtgtttgtttcctctatgtttaa 46
Query: 960 tacagtttcaaataagaagattgccatcctagggtttgctttcaag 1005
|||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 45 atcagtttcaaataag-agattgccatcctagggtttnctttcaag 1
>KJC_c03521
Length = 1265
Score = 383 bits (193), Expect = e-106
Identities = 725/900 (80%), Gaps = 3/900 (0%)
Strand = Plus / Plus
Query: 120 tgcctggaacagtgaccagctgcccatttatgagccaggccttgatgacgtggtgaagcg 179
||||||||||||||| || || ||||| ||||||||||||||||| | |||||||||
Sbjct: 306 tgcctggaacagtgagcaactccccatctatgagccaggccttgacggtgtggtgaagga 365
Query: 180 gtgccgaggcaggaacctcttcttcagcgttgatgtggagaaacatgtctctgaggctga 239
||| |||| | ||| || ||||| || ||| ||||| |||||||| || ||||||||
Sbjct: 366 gtgtagaggaaagaatcttttctttagtactgacgtggaaaaacatgtttcggaggctga 425
Query: 240 tatagtcttcgtttctgtcaacactccgaccaaaactcgcggactgggggctggtaaagc 299
||||||||| || || || || || || |||||||| | |||| || ||||| |||||
Sbjct: 426 tatagtctttgtatcagttaatac-ccaaccaaaaccag--gacttggagctggcaaagc 482
Query: 300 tgctgatctgacatactgggagagtgcagcgcgtatgattgctgatgtctcaaagtcaaa 359
|||||| |||| || ||||||||||| || || |||||||| ||||| ||||| || |
Sbjct: 483 agctgatttgacttattgggagagtgctgctcgaatgattgcagatgtatcaaaatccga 542
Query: 360 caaaattgtggttgagaaatcaactgtcccagttaagacggcagaggcaattgaaaaaat 419
|||||||| |||||||||||||||||||| || || || || |||||||||||||||||
Sbjct: 543 taaaattgttgttgagaaatcaactgtccctgtgaaaacagctgaggcaattgaaaaaat 602
Query: 420 tttgacccacaacagcaaggggatcaaattccagatcctctcaaacccagagttccttgc 479
|||||||||||||||||| || ||||| || ||||| || || ||||| || || |||||
Sbjct: 603 tttgacccacaacagcaaaggaatcaactttcagattctatcgaaccccgaatttcttgc 662
Query: 480 tgagggaactgcaatcagcgatctgtttaacccagatagagttcttattggaggaaggga 539
|| ||||||||||| || || ||| | |||||| | ||||| ||||| || |||||
Sbjct: 663 cgaaggaactgcaattcaagacctttttcatccagatcgtgttctaattggtggcaggga 722
Query: 540 aaccccagaaggtcaagaagccatcaaagcattgaaggatgtttatgctcattgggtacc 599
|| |||||||| ||| |||| || || ||||||| | ||||||||| |||||||| ||
Sbjct: 723 gactccagaaggacaaaaagcaattgaaacattgaaaggtgtttatgcccattgggtccc 782
Query: 600 tgaagatcgcattctaaccaccaacctttggtccgcagagctgtccaagcttgcagccaa 659
|| || | ||| || ||||||||||||||| || ||||| || || ||||| || ||
Sbjct: 783 tgtggaacaaattatatgcaccaacctttggtctgccgagctctctaaacttgctgcaaa 842
Query: 660 tgccttcttggcccagaggatctcatccgttaatgctatgtctgcactatgtgaggcaac 719
|||||| ||||| |||||||| || || || ||||| ||||| || || ||||| || ||
Sbjct: 843 tgcctttttggcacagaggatttcctctgtcaatgccatgtcagccctctgtgaagccac 902
Query: 720 tggggcagatgttaccgaggtttcatatgctgttggcaaggacactagaattggtcccaa 779
|| ||||| ||| |||| |||||| |||||||||| |||||||| |||||||| |||||
Sbjct: 903 cggtgcagacgttgccgaagtttcacatgctgttggtaaggacacaagaattgggcccaa 962
Query: 780 gtttttgaatgctagcgttggttttggtgggtcctgcttccagaaggacattttgaacct 839
||| ||||||||||| || ||||||||||| || || |||||||| || ||||||||| |
Sbjct: 963 gttcttgaatgctagtgtgggttttggtggatcttgtttccagaaagatattttgaactt 1022
Query: 840 tgtatacatctgcgagtgcaatggccttccagatgtggcagagtattggaaacaagtaat 899
|| || || |||||||||||||| ||||| || || || | || |||||||| |||||
Sbjct: 1023 ggtctatatttgcgagtgcaatggtcttcctgaggttgcgaattactggaaacaggtaat 1082
Query: 900 caagatcaatgattatcaaaagaaccgattcgtgaaccgtgttgtttcctctatgtttaa 959
||| | ||||| || || |||| ||| ||||||| |||||| ||||| || ||||| ||
Sbjct: 1083 taaggtaaatgactaccagaagacccgcttcgtgagccgtgtggtttcttcaatgttcaa 1142
Query: 960 tacagtttcaaataagaagattgccatcctagggtttgctttcaagaaggatactggtga 1019
||||||||| ||||||||||| || | || |||||||||||||| || ||||||||
Sbjct: 1143 cacagtttcaggaaagaagattgcaattttgggatttgctttcaagaaagacactggtga 1202
>KJC_c09678
Length = 306
Score = 81.8 bits (41), Expect = 3e-15
Identities = 195/245 (79%), Gaps = 1/245 (0%)
Strand = Plus / Minus
Query: 571 ttgaaggatgtttatgctcattgggtacctgaagatcgcattctaaccaccaacctttgg 630
||||| ||||| |||||||||||||| ||||||||| | || | | ||||| ||||||
Sbjct: 304 ttgaaagatgtgtatgctcattgggttcctgaagatagaatcatctcgaccaatctttgg 245
Query: 631 tccgcagagctgtccaagcttgcagccaatgccttcttggcccagaggatctcatccgtt 690
|| |||||| |||| ||| | || || |||||||| || || || || || || || ||
Sbjct: 244 tctgcagagttgtcaaagttagctgcaaatgcctt-ttagcacaaagaatttcttctgtc 186
Query: 691 aatgctatgtctgcactatgtgaggcaactggggcagatgttaccgaggtttcatatgct 750
||||| ||||| || || || || |||||||| ||||||||| | ||||||| |||||
Sbjct: 185 aatgcaatgtcagctctttgcgaagcaactggagcagatgtttcgcaggtttctcatgct 126
Query: 751 gttggcaaggacactagaattggtcccaagtttttgaatgctagcgttggttttggtggg 810
||||| || ||||| |||||||| || || |||||||| || || ||||||||||| ||
Sbjct: 125 gttggtaaagacacaagaattggaccaaaatttttgaacgccagtgttggttttggcgga 66
Query: 811 tcctg 815
|||||
Sbjct: 65 tcctg 61