Jatropha Genome Database
- JcCA0029841.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0029841.30 + phase: 0 /partial
(1084 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00458 2014 0.0
KJC_c00201 422 e-118
KJC_c11270 107 6e-23
KJC_s20823 84 8e-16
KJC_c02721 60 1e-08
KJC_s18657 58 5e-08
>KJC_c00458
Length = 1290
Score = 2014 bits (1016), Expect = 0.0
Identities = 1040/1044 (99%), Gaps = 3/1044 (0%)
Strand = Plus / Plus
Query: 42 gcaacaagctcttcttcaacaacagtctctctatcatccagctggtcttctcgctcctcc 101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcaacaagctcttcttcaacaacagtctctctatcatccagctggtcttctcgctcctcc 60
Query: 102 tcagattgagccaattcccagtggaaatctgcctcctggttttgatccaagcacttgccg 161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcagattgagccaattcccagtggaaatctgcctcctggttttgatccaagcacttgccg 120
Query: 162 cagtgtgtatgttggaaatatccatacacaggtgactgaacctcttcttcaagaagtttt 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagtgtgtatgttggaaatatccatacacaggtgactgaacctcttcttcaagaagtttt 180
Query: 222 ttcaagtactggtcttgttgagggctgtaaacttattagaaaggaaaagtcgtcctatgg 281
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 181 ttcaagtactggtcttgttgagggctgtaaacttattagaaaggaaa-gtcgtcctatgg 239
Query: 282 atttattcactactatgatcgtagatcagctgctcttgctatattatctcttaatggaag 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 atttattcactactatgatcgtagatcagctgctcttgctatattatctcttaatggaag 299
Query: 342 gcatctatttgggcagccaatcaaagttaattgggcatatgctagtggtcagcgagaaga 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gcatctatttgggcagccaatcaaagttaattgggcatatgctagtggtcagcgagaaga 359
Query: 402 tacatcaggtcacttcaacatttttgttggagatcttagtcctgaggttactgatgcaac 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tacatcaggtcacttcaacatttttgttggagatcttagtcctgaggttactgatgcaac 419
Query: 462 actgtttgcctgcttttcagtttatcccagttgttcagatgcaagggttatgtgggatca 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 actgtttgcctgcttttcagtttatcccagttgttcagatgcaagggttatgtgggatca 479
Query: 522 gaagactgggcgttcaagaggttttggatttgtttctttcagaaatcaacaggatgccca 581
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 480 gaagactgggcgttcaagaggttttggatttgtt-ctttcagaaatcaacaggatgccca 538
Query: 582 aagtgcaataaatgacttaacaggtaagtggcttgggagcagacagattcgttgtaattg 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 aagtgcaataaatgacttaacaggtaagtggcttgggagcagacagattcgttgtaattg 598
Query: 642 ggccacaaaaggcgctggttccaatgatgacaaacaaagctctgattcaaaaagtgtggt 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 ggccacaaaaggcgctggttccaatgatgacaaacaaagctctgattcaaaaagtgtggt 658
Query: 702 ggaactaacaaatggcacatcagaagagggcaaagacacggccactaatgaggctcctga 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 ggaactaacaaatggcacatcagaagagggcaaagacacggccactaatgaggctcctga 718
Query: 762 aaacaatcctcagtatacaactgtttatgtgggaaatcttgctccagaggttacgcagct 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 aaacaatcctcagtatacaactgtttatgtgggaaatcttgctccagaggttacgcagct 778
Query: 822 tgatctccatcgccacttccatgctcttggtgctggagttattgaggaggtccgggttca 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 tgatctccatcgccacttccatgctcttggtgctggagttattgaggaggtccgggttca 838
Query: 882 gcgggataaaggatttggtttcgtgagatacagtactcatgctgaggctgctctagcaat 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 gcgggataaaggatttggtttcgtgagatacagtactcatgctgaggctgctctagcaat 898
Query: 942 tcagatgggaaatacccagtcaattctttgtggcaaacaaataaagtgctcttggggtag 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 899 tcagatgggaaatacccagtcaattctttgtggcaaacaaataaagtgctcttggggtag 958
Query: 1002 caagcccactccaccagggacgagttcaaatccgcttccaccgcctgcagctgcactttt 1061
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 959 caagcccactccaccagggacgagttcaaatccgcttccaccgcctgcagctgcaccttt 1018
Query: 1062 g-caggcctctctgctactgacct 1084
| ||||||||||||||||||||||
Sbjct: 1019 gccaggcctctctgctactgacct 1042
>KJC_c00201
Length = 1574
Score = 422 bits (213), Expect = e-118
Identities = 682/835 (81%), Gaps = 5/835 (0%)
Strand = Plus / Minus
Query: 121 agtggaaatctgcctcctggttttgatccaagcacttgccgcagtgtgtatgttggaaat 180
|||||||||||||||||||| |||||| ||||| | ||||||||||||||||| |||||
Sbjct: 1325 agtggaaatctgcctcctggctttgattcaagctcatgccgcagtgtgtatgtgggaaac 1266
Query: 181 atccatacacaggtgactgaacctcttcttcaagaagttttttcaagtactggtcttgtt 240
||||| | ||||| || || || ||||||||||| ||||| |||| | |||| ||
Sbjct: 1265 atccaccctcaggttacggagccccttcttcaagaggttttctcaaatgctggagccctt 1206
Query: 241 gagggctgtaaacttattagaaaggaaaagtcgtcctatggatttattcactactatgat 300
|| || || || || ||||| || || ||||| |||||||| ||| | | |||| ||||
Sbjct: 1205 gaaggatgcaagctgattaggaaagagaagtcatcctatggttttgtggattactttgat 1146
Query: 301 cgtagatcagctgctcttgctatattatctcttaatggaaggcatctatttgggcagcca 360
|| | ||||| ||| |||| || | | ||||||||||||||||| ||||| |||||
Sbjct: 1145 cgccgttcagcagctattgcgatcgtgacccttaatggaaggcatctgtttggacagcct 1086
Query: 361 atcaaagttaattgggcatatgctagtggtcagcgagaagatacatcaggtcacttcaac 420
|| ||||| |||||||| ||||| ||| |||| |||| |||||||||||||| |||||
Sbjct: 1085 attaaagtcaattgggcttatgccagtagtcaaagagaggatacatcaggtcatttcaat 1026
Query: 421 atttttgttggagatcttagtcctgaggttactgatgcaacactgtttgcctgcttttca 480
||||||||||| |||||||| ||||| ||||||||||| || |||| ||| || || ||
Sbjct: 1025 atttttgttggtgatcttagccctgaagttactgatgctactctgtatgcgtgtttctct 966
Query: 481 gtttatcccagttgttcagatgcaagggttatgtgggatcagaagactgggcgttcaaga 540
| ||||| |||||||||||||||| |||||||||||| |||||||||||||| |||||
Sbjct: 965 gggtatccgagttgttcagatgcaaaggttatgtgggaccagaagactgggcgctcaagg 906
Query: 541 ggttttggatttgtttctttcagaaatcaacaggatgcccaaagtgcaataaatgactta 600
|||||||| |||||||||||||| | ||||||||||||||| || |||||||||||||||
Sbjct: 905 ggttttgggtttgtttctttcaggagtcaacaggatgcccagagcgcaataaatgactta 846
Query: 601 acaggtaagtggcttgggagcagacagattcgttgtaattgggccacaaaaggcgctggt 660
|| || ||||||||||| |||||||| ||||| ||||| |||||||| ||||| ||| |
Sbjct: 845 actggaaagtggcttggaagcagacaaattcggtgtaactgggccacgaaaggtgctaat 786
Query: 661 tccaatgatgacaaacaaagctctgattcaaaaagtgtggtggaactaacaaatggcaca 720
||||||||||||| || || ||||| | |||||||| || || ||||||||||| |||
Sbjct: 785 gccaatgatgacaagcagagttctgacgccaaaagtgtcgtagagctaacaaatggaaca 726
Query: 721 tcagaagagggcaaagacacggccactaatgaggctcctgaaaacaatcctcagtataca 780
|| ||||| ||| |||| | | | | |||| || || || || ||||||||||||||
Sbjct: 725 tctgaagacggccaagaaaag---aatgatgatgcgccagagaataatcctcagtatacc 669
Query: 781 actgtttatgtgggaaatcttgctccagaggtta-cgcagcttgatctccatcgccactt 839
||||||||||| || || |||||||| ||||||| | || ||||| |||| || ||
Sbjct: 668 actgtttatgttggcaaccttgctcccgaggttagttctgc-agatcttcatcagcattt 610
Query: 840 ccatgctcttggtgctggagttattgaggaggtccgggttcagcgggataaaggatttgg 899
|||||| ||||||| ||| |||||| || || ||||| || || |||||||| |||||
Sbjct: 609 ccatgcacttggtgtaggaactattgaagatgtgcgggtgcaacgagataaaggttttgg 550
Query: 900 tttcgtgagatacagtactcatgctgaggctgctctagcaattcagatgggaaat 954
||| |||||||||||||| ||| |||| || ||||| || |||||||||||||||
Sbjct: 549 ttttgtgagatacagtacacatactgaagcagctcttgctattcagatgggaaat 495
>KJC_c11270
Length = 292
Score = 107 bits (54), Expect = 6e-23
Identities = 96/110 (87%)
Strand = Plus / Minus
Query: 331 cttaatggaaggcatctatttgggcagccaatcaaagttaattgggcatatgctagtggt 390
||||||||||||||||| ||||| ||||| || ||||| |||||||| ||||| ||| ||
Sbjct: 111 cttaatggaaggcatctgtttggacagcctattaaagtcaattgggcttatgccagtagt 52
Query: 391 cagcgagaagatacatcaggtcacttcaacatttttgttggagatcttag 440
|| |||| |||||||||||||| ||||| ||||||||||| ||||||||
Sbjct: 51 caaagagaggatacatcaggtcatttcaatatttttgttggtgatcttag 2
>KJC_s20823
Length = 355
Score = 83.8 bits (42), Expect = 8e-16
Identities = 156/190 (82%), Gaps = 3/190 (1%)
Strand = Plus / Minus
Query: 766 aatcctcagtatacaactgtttatgtgggaaatcttgctccagaggttacg-cagcttga 824
|||||||||||||| ||||||||||| || || |||||||| ||||||| | || ||
Sbjct: 241 aatcctcagtataccactgtttatgttggcaaccttgctcccgaggttagttctgca-ga 183
Query: 825 tctccatcgccacttccatgctcttggtgctggagttattgaggaggtccgggttcagcg 884
||| |||| || |||||||| ||||||| ||| |||||| || || ||||| || ||
Sbjct: 182 tcttcatcagcatttccatgcacttggtgtaggaactattgaagatgtgcgggtgcaacg 123
Query: 885 ggataaaggatttggtttcgtgagatacagtactcatgctgaggctgctctagcaattca 944
|||||||| |||||||| |||||||||||||| ||| |||| || ||||| || |||||
Sbjct: 122 agataaaggttttggttt-gtgagatacagtacacatactgaagcagctcttgctattca 64
Query: 945 gatgggaaat 954
||||||||||
Sbjct: 63 gatgggaaat 54
>KJC_c02721
Length = 713
Score = 60.0 bits (30), Expect = 1e-08
Identities = 117/146 (80%)
Strand = Plus / Plus
Query: 754 gctcctgaaaacaatcctcagtatacaactgtttatgtgggaaatcttgctccagaggtt 813
|||||||||||||||||| || || ||||| ||||| || |||||| | | ||||||
Sbjct: 167 gctcctgaaaacaatcctgcatacactactgtctatgttggtaatctttcccacgaggtt 226
Query: 814 acgcagcttgatctccatcgccacttccatgctcttggtgctggagttattgaggaggtc 873
|| || ||| |||||| | || || ||||||||||| ||||| || |||||||||||
Sbjct: 227 actcaagctgagctccattgtcaatttcatgctcttggagctggggtgattgaggaggtt 286
Query: 874 cgggttcagcgggataaaggatttgg 899
|| |||||| | |||||||| |||||
Sbjct: 287 cgtgttcagagagataaaggttttgg 312
>KJC_s18657
Length = 380
Score = 58.0 bits (29), Expect = 5e-08
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 142 tttgatccaagcacttgccgcagtgtgtatgttggaaatatccatacacaggtgactgaa 201
|||||| ||||| | ||||||||||||||||| ||||| ||||| | ||||| || ||
Sbjct: 156 tttgattcaagctcatgccgcagtgtgtatgtgggaaacatccaccctcaggttacggag 215
Query: 202 cctcttcttcaagaagttttttcaa 226
|| ||||||||||| ||||| ||||
Sbjct: 216 ccccttcttcaagaggttttctcaa 240