Jatropha Genome Database
- JcCA0029821.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0029821.10 + phase: 0
(447 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00222 886 0.0
KJC_c00274 242 6e-64
KJC_c00839 194 1e-49
KJC_c08090 184 1e-46
KJC_s17400 133 4e-31
>KJC_c00222
Length = 936
Score = 886 bits (447), Expect = 0.0
Identities = 447/447 (100%)
Strand = Plus / Plus
Query: 1 atggcttccaagcgtattttgaaggaactcaaggatttgcagaaagatccacctacttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atggcttccaagcgtattttgaaggaactcaaggatttgcagaaagatccacctacttct 260
Query: 61 tgcagtgcaggtcctgtagctgaagacatgttccactggcaagcaaccatcatgggacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcagtgcaggtcctgtagctgaagacatgttccactggcaagcaaccatcatgggacca 320
Query: 121 actgatagtccatatgcaggaggtgtatttctagtcactatccattttcctccagattat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actgatagtccatatgcaggaggtgtatttctagtcactatccattttcctccagattat 380
Query: 181 cctttcaagcctccgaaggttgcatttaggaccaaggtgtttcatccaaacataaacagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctttcaagcctccgaaggttgcatttaggaccaaggtgtttcatccaaacataaacagt 440
Query: 241 aatggaagcatttgtcttgatatcctcaaagaacaatggagccctgctctcaccatttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatggaagcatttgtcttgatatcctcaaagaacaatggagccctgctctcaccatttct 500
Query: 301 aaggtattgctatctatttgctcattgctgactgatccaaatcccgatgacccacttgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaggtattgctatctatttgctcattgctgactgatccaaatcccgatgacccacttgtc 560
Query: 361 ccagagattgcccatatgtataagactgatcgagcaaagtatgaagcaactgcacgcagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccagagattgcccatatgtataagactgatcgagcaaagtatgaagcaactgcacgcagc 620
Query: 421 tggacacagaagtatgccatgggttga 447
|||||||||||||||||||||||||||
Sbjct: 621 tggacacagaagtatgccatgggttga 647
>KJC_c00274
Length = 787
Score = 242 bits (122), Expect = 6e-64
Identities = 367/446 (82%), Gaps = 2/446 (0%)
Strand = Plus / Minus
Query: 1 atggcttccaagcgtattttgaaggaactcaaggatttgcagaaagatccacctacttct 60
||||| || ||||| || |||||||| ||||||||| | ||||| ||||| ||||| |||
Sbjct: 676 atggcatcgaagcggatcttgaaggagctcaaggatctccagaaggatcctcctacctct 617
Query: 61 tgcagtgcaggtcctgtagctgaagacatgttccactggcaagcaaccatcatgggacca 120
||||| ||||| ||||| || |||||||||||||| ||||||||||| || ||||| ||
Sbjct: 616 tgcagcgcaggccctgttgcggaagacatgttccattggcaagcaacaattatgggtcct 557
Query: 121 actgatagtccatatgcaggaggtgtatttctagtcactatccattttcctccagattat 180
||||||||||||||||||| || || |||||||| || || |||||||||||||| |||
Sbjct: 556 cctgatagtccatatgcaggtggagtgtttctagtgacgattcattttcctccagactat 497
Query: 181 cctttcaagcctccgaaggttgcatttaggaccaaggtgtttcatccaaacataaacagt 240
|| || || || |||||||||||||| ||||| ||||| ||||| || || || |||||
Sbjct: 496 ccatttaaaccaccgaaggttgcattcaggacaaaggtctttcaccccaatatcaacagc 437
Query: 241 aatggaagcatttgtcttgatatcctcaaagaacaatggagccctgctctcaccatttct 300
||||| |||||||| |||||||| | || || || ||||||||||| || ||||||||
Sbjct: 436 aatggtagcatttgccttgatattttgaaggagcagtggagccctgcccttaccatttcc 377
Query: 301 aaggtattgctatctatttgctcattgctgactgatccaaatcccgatgacccacttgtc 360
||||| ||||| || ||||| || | |||| || |||||||| || || || | ||
Sbjct: 376 aaggtgttgctttcaatttgttctctattgacggacccaaatcctgacgatccgttggtg 317
Query: 361 ccagagattgcccatatgtataagactgat-cgagcaaagtatgaagcaactgcacgcag 419
||||| |||||||| ||||||||||||||| ||||||| || || ||||| ||| | ||
Sbjct: 316 ccagaaattgcccacatgtataagactgataggagcaaa-tacgaggcaacagcaaggag 258
Query: 420 ctggacacagaagtatgccatgggtt 445
|||||| ||||||||||| |||||||
Sbjct: 257 ctggacccagaagtatgctatgggtt 232
>KJC_c00839
Length = 808
Score = 194 bits (98), Expect = 1e-49
Identities = 287/350 (82%)
Strand = Plus / Plus
Query: 1 atggcttccaagcgtattttgaaggaactcaaggatttgcagaaagatccacctacttct 60
||||| || ||||| || |||||||||||||||||||| ||||| ||||| || || ||
Sbjct: 59 atggcgtcgaagcggatcttgaaggaactcaaggatttacagaaggatcctcccacatca 118
Query: 61 tgcagtgcaggtcctgtagctgaagacatgttccactggcaagcaaccatcatgggacca 120
||||| || ||||| || |||||||||||||| || |||||||| || |||||||| ||
Sbjct: 119 tgcagcgctggtcccgttgctgaagacatgtttcattggcaagctacgatcatgggtccc 178
Query: 121 actgatagtccatatgcaggaggtgtatttctagtcactatccattttcctccagattat 180
|||| |||||||||||||| ||||| || || || ||||| ||||| ||||| ||||||
Sbjct: 179 cctgacagtccatatgcagggggtgttttccttgttactattcatttccctccggattat 238
Query: 181 cctttcaagcctccgaaggttgcatttaggaccaaggtgtttcatccaaacataaacagt 240
|| || |||||||| ||||| || || || || ||||| || || ||||| || |||||
Sbjct: 239 ccatttaagcctcccaaggtggctttcagaacaaaggtattccacccaaatattaacagc 298
Query: 241 aatggaagcatttgtcttgatatcctcaaagaacaatggagccctgctctcaccatttct 300
|| || |||||||||||||| || | || || ||||||||||||||||| ||||| |||
Sbjct: 299 aacgggagcatttgtcttgacatattgaaggagcaatggagccctgctctaaccatatct 358
Query: 301 aaggtattgctatctatttgctcattgctgactgatccaaatcccgatga 350
||||| ||||| || ||||| || ||| |||| ||||| ||||| |||||
Sbjct: 359 aaggtgttgctttcaatttgttctttgttgacggatcccaatcctgatga 408
>KJC_c08090
Length = 452
Score = 184 bits (93), Expect = 1e-46
Identities = 243/293 (82%)
Strand = Plus / Plus
Query: 19 ttgaaggaactcaaggatttgcagaaagatccacctacttcttgcagtgcaggtcctgta 78
|||||||| ||||||||| | ||||| ||||| ||||| |||||||| || ||||| |||
Sbjct: 2 ttgaaggagctcaaggatctccagaaggatcctcctacctcttgcagcgctggtccggta 61
Query: 79 gctgaagacatgttccactggcaagcaaccatcatgggaccaactgatagtccatatgca 138
||||| |||||||| |||||||||||||| || ||||| || |||| ||||| || |
Sbjct: 62 gctgaggacatgtttcactggcaagcaacaataatgggtcctcctgacagtccttacact 121
Query: 139 ggaggtgtatttctagtcactatccattttcctccagattatcctttcaagcctccgaag 198
||||| || |||||||| ||||| ||||||||||| |||||||| || ||||| || |||
Sbjct: 122 ggaggcgtgtttctagttactattcattttcctcctgattatccatttaagccacctaag 181
Query: 199 gttgcatttaggaccaaggtgtttcatccaaacataaacagtaatggaagcatttgtctt 258
|||||||| ||||| ||||| ||||| ||||| || ||||||||||| |||||||| |||
Sbjct: 182 gttgcattcaggacaaaggtttttcacccaaatattaacagtaatggcagcatttgcctt 241
Query: 259 gatatcctcaaagaacaatggagccctgctctcaccatttctaaggtattgct 311
|| || || || || || |||||||| || || || || |||||||| |||||
Sbjct: 242 gacattctaaaggagcagtggagcccagccctgacaatatctaaggtgttgct 294
>KJC_s17400
Length = 302
Score = 133 bits (67), Expect = 4e-31
Identities = 133/155 (85%)
Strand = Plus / Plus
Query: 1 atggcttccaagcgtattttgaaggaactcaaggatttgcagaaagatccacctacttct 60
||||| || ||||| || |||||||| ||||||||||| ||||| ||||| ||||| |||
Sbjct: 138 atggcatcgaagcggatcttgaaggagctcaaggatttccagaaggatcctcctacctct 197
Query: 61 tgcagtgcaggtcctgtagctgaagacatgttccactggcaagcaaccatcatgggacca 120
||||| ||||| ||||| || |||||||||||||| ||||||||||| || ||||| ||
Sbjct: 198 tgcagcgcaggccctgttgcggaagacatgttccattggcaagcaacaattatgggtcct 257
Query: 121 actgatagtccatatgcaggaggtgtatttctagt 155
||||||||||||||||||| || || ||||||||
Sbjct: 258 cctgatagtccatatgcaggtggagtgtttctagt 292