Jatropha Genome Database
- JcCA0029471.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0029471.20 + phase: 0 /pseudo
(1954 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c09399 1306 0.0
>KJC_c09399
Length = 705
Score = 1306 bits (659), Expect = 0.0
Identities = 697/708 (98%), Gaps = 3/708 (0%)
Strand = Plus / Plus
Query: 1167 gtacgagggtcttcactctaatttnnnnnnngtcggcattgatggcgtgaaggtggacgt 1226
|||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 gtacgagggtcttcactctaatttaaaaaaagtcggcattgatggcgtgaaggtggacgt 60
Query: 1227 tattcatttgctagaaatgctgtgtgaagattatggaggcagagtaaatcttgcaaaggc 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tattcatttgctagaaatgctgtgtgaagattatggaggcagagtaaatcttgcaaaggc 120
Query: 1287 atattacaaggccttgactgcctctgtaagaaaacatttcaatggaaatggtgtaatagc 1346
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 121 atattacaaggccttgactgcctctgtaagaaa-catttcaatggaaatggtgtaatagc 179
Query: 1347 tagcatggaacactgcaacgatttcatgtttcttggaactgaaaccatctctcttggtcg 1406
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 tagcttggaacactgcaacgatttcatgtttcttggaactgaaaccatctctcttggtcg 239
Query: 1407 cgttggtgatgatttttggtgcactgatccatctggtgatcccaacggtacattttggct 1466
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 240 cgttggtgatgatttttggtgcactgatccatctggtgatcc-aacggtacattttggct 298
Query: 1467 tcaaggttgtcacatggtccactgtgcttacaatagcttgtggatgggcaatttcataca 1526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tcaaggttgtcacatggtccactgtgcttacaatagcttgtggatgggcaatttcataca 358
Query: 1527 cccagattgggacatgttccaatctacacatccttgtgctgaattccatgctgcttctag 1586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 cccagattgggacatgttccaatctacacatccttgtgctgaattccatgctgcttctag 418
Query: 1587 ggcaatttctggcggaccaatttacgttagcgactctgtcggaaagcacaatttcccgtt 1646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ggcaatttctggcggaccaatttacgttagcgactctgtcggaaagcacaatttcccgtt 478
Query: 1647 gctcaagcgtctagtcttgccggacggttcaattctccgatgtcaatactatgctcttcc 1706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gctcaagcgtctagtcttgccggacggttcaattctccgatgtcaatactatgctcttcc 538
Query: 1707 tacaagagattgcctctttgaggatcctctccatgatggcaaaaccatgcttaaaatttg 1766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 tacaagagattgcctctttgaggatcctctccatgatggcaaaaccatgcttaaaatttg 598
Query: 1767 gaacctcaataagtttactggagttattggtgcatttaactgccaaggaggaggctggaa 1826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 gaacctcaataagtttactggagttattggtgcatttaactgccaaggaggaggctggaa 658
Query: 1827 cagagagactagacgcaaccaatgtgcctctacaattttccaacttgg 1874
|||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 659 cagagagactagacgcaaccaatgtgcctc-acaattttccaacttgg 705