Jatropha Genome Database
- JcCA0029141.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0029141.10 - phase: 0 /partial
(1906 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02892 1025 0.0
KJC_c11911 678 0.0
>KJC_c02892
Length = 517
Score = 1025 bits (517), Expect = 0.0
Identities = 517/517 (100%)
Strand = Plus / Minus
Query: 1102 ctgttgagagatatggtgtggaaaagagataggcgcgtttgtgatgcttacttggaatgc 1161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ctgttgagagatatggtgtggaaaagagataggcgcgtttgtgatgcttacttggaatgc 458
Query: 1162 agggaaaagaatgaccgtgaagctgtttccacgtttctcaagctcacatcatcaccagca 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 agggaaaagaatgaccgtgaagctgtttccacgtttctcaagctcacatcatcaccagca 398
Query: 1222 agttcaggattgcatgtcattcatattgctgcagagatggcaccagttgctaaggttggt 1281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 agttcaggattgcatgtcattcatattgctgcagagatggcaccagttgctaaggttggt 338
Query: 1282 ggtttgggagatgttgtgactggtcttggaaaagcactgcaaaagagaggacatcttgtg 1341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ggtttgggagatgttgtgactggtcttggaaaagcactgcaaaagagaggacatcttgtg 278
Query: 1342 gaaattattctgcctaaatacgattgcatgcaatatgatggtattggcaatttgagggct 1401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gaaattattctgcctaaatacgattgcatgcaatatgatggtattggcaatttgagggct 218
Query: 1402 ctagatgtggtcgtggaatcatattttgatggcaaattatacaaaaataaaatatgggtt 1461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 ctagatgtggtcgtggaatcatattttgatggcaaattatacaaaaataaaatatgggtt 158
Query: 1462 ggcaccattgaaggtcttcctgtttattttattgagcctcatcaccctaacaagtttttc 1521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 ggcaccattgaaggtcttcctgtttattttattgagcctcatcaccctaacaagtttttc 98
Query: 1522 tggagagggcagttttatggggagcatgatgatttcaaacgcttttcatttttcagccga 1581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 tggagagggcagttttatggggagcatgatgatttcaaacgcttttcatttttcagccga 38
Query: 1582 gctgcacttgagttgcttcttcaagccggcaaaaaac 1618
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 gctgcacttgagttgcttcttcaagccggcaaaaaac 1
>KJC_c11911
Length = 558
Score = 678 bits (342), Expect = 0.0
Identities = 342/342 (100%)
Strand = Plus / Plus
Query: 24 ggccatagatggaggagagaagctttctagtattcctgatgaaatgaaaccttcgggctt 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 ggccatagatggaggagagaagctttctagtattcctgatgaaatgaaaccttcgggctt 276
Query: 84 aaaaatagagggcggggagcaattttcacatgtccgacttgaggatttgattggcatgat 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 aaaaatagagggcggggagcaattttcacatgtccgacttgaggatttgattggcatgat 336
Query: 144 aagaaatgcagagaaaaacatccttcttctcaatcaagctcgggtccatgcactagaaga 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 aagaaatgcagagaaaaacatccttcttctcaatcaagctcgggtccatgcactagaaga 396
Query: 204 tcttgaaagaattcttgctgagaaggaaatattgcaaggggaaattaatgttttggagat 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tcttgaaagaattcttgctgagaaggaaatattgcaaggggaaattaatgttttggagat 456
Query: 264 gagattggcagaaactgatgcaagaatgaaggttgctgcccaagaaaagatacatgtgga 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gagattggcagaaactgatgcaagaatgaaggttgctgcccaagaaaagatacatgtgga 516
Query: 324 actcatgggggatcagttagagaagctaaagaatgaactgac 365
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 actcatgggggatcagttagagaagctaaagaatgaactgac 558