Jatropha Genome Database
- JcCA0028741.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0028741.10 - phase: 0
(582 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c09119 1007 0.0
>KJC_c09119
Length = 592
Score = 1007 bits (508), Expect = 0.0
Identities = 541/551 (98%), Gaps = 1/551 (0%)
Strand = Plus / Plus
Query: 1 atgattgctgctgttgatgccattcgagtaaaaggggattccattggtggagtggtcaca 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 42 atgattgctgctgttgatgccattcgagtaaaaggggattccatcggtggagtggtcaca 101
Query: 61 tgcattgtgaggaatgccccatgtgggcttggttcgccagtatttgacaaacttgaagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 tgcattgtgaggaatgccccatgtgggcttggttcgccagtatttgacaaacttgaagcc 161
Query: 121 gagtttgctaaagctctcttgtcactacctgcgtcaaagggctttgaagttggcagtggg 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 162 gagtttgctaaagctctcttgtcactccctgcgtcaaagggctttgaagttggcagtggg 221
Query: 181 tttgcaggcacttttttgactggcagtgaacataatgatgaattttaccttgacgaacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 tttgcaggcacttttttgactggcagtgaacataatgatgaattttaccttgacgaacat 281
Query: 241 ggaaagattaggacaagaagaaatcgttctggtgggatacaggaaggaatttccaatggt 300
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 282 ggaaagattaggacaagaacaaatcgttctggtgggatacagggaggaatttccaatggt 341
Query: 301 gaaattat-aaaaatgagagtcgctttcaagccaacagctacaatatcaaagaagcaaaa 359
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gaaattataaaaaatgagagtcgctttcaagccaacagctacaatatcaaagaagcaaaa 401
Query: 360 tacagtgacaagagatagaatggagatagaactaattgcttgcggtcgccatgatccttg 419
||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 402 tacagtgactagagatagaaaggagatagaactaattgctcgcggtcgccatgatccttg 461
Query: 420 tgttgtcccacgagcggtacctatggtagaagccatggtagctctggttctcgtggacca 479
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 462 ngttgtcccacgagcggtacctatggtagaagccatggttgctctggttctcgtggacca 521
Query: 480 gttgatggcacatcatgcacagtgtggtctgtttcctatcaacccaatgctacaagagcc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gttgatggcacatcatgcacagtgtggtctgtttcctatcaacccaatgctacaagagcc 581
Query: 540 cttgaacgagg 550
|||||||||||
Sbjct: 582 cttgaacgagg 592