Jatropha Genome Database
- JcCA0028701.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0028701.10 - phase: 0
(1737 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03070 1289 0.0
KJC_c06015 1229 0.0
>KJC_c03070
Length = 687
Score = 1289 bits (650), Expect = 0.0
Identities = 685/690 (99%), Gaps = 5/690 (0%)
Strand = Plus / Plus
Query: 872 acagagcttttg-cgtataagtcatcaggtagaatagcggaggcgattgctgattgcaac 930
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acagagcttttgtcgtataagtcatcaggtagaatagcggaggcgattgctgattgcaac 60
Query: 931 aaaaattta-gctcttgaccctacatgtatacaagcactagaaacaagagcgtcacttct 989
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaaatttaagctcttgaccctacatgtatacaagcactagaaacaagagcgtcacttct 120
Query: 990 agaaacaatccgatgcttgcctgattgtttgcacgatcttgaacacttgaaacttttata 1049
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaa-caatccgatgcttgcctgattgtttgcacgatcttgaacacttgaaacttttata 179
Query: 1050 caattcaatcttgcgagaccgaaaacttccaggtccggcctggaaacggcataacgttcg 1109
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 180 caattcaatcttgcgagaccgaaa-cttccaggtccggcctggaaacggcataacgttcg 238
Query: 1110 atacagggagattccagggaaactctgtgcattgactacaaagattcaagaactgaaact 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 atacagggagattccagggaaactctgtgcattgactacaaagattcaagaactgaaact 298
Query: 1170 gagagtagcttctggagaaactggaaatgttgattattatgctttaattggactaaggcg 1229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gagagtagcttctggagaaactggaaatgttgattattatgctttaattggactaaggcg 358
Query: 1230 gggttgttcaagatctgaattagaaagagctcatttattgctctgtttaaggcataaacc 1289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gggttgttcaagatctgaattagaaagagctcatttattgctctgtttaaggcataaacc 418
Query: 1290 tgataaggctataaattttgttgaaagatgtgaatttgcagatgatagggatcttgattc 1349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tgataaggctataaattttgttgaaagatgtgaatttgcagatgatagggatcttgattc 478
Query: 1350 agtcaaagatagagctaaaatgtctgcattattgctctatagattgcttcaaaagggtta 1409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 agtcaaagatagagctaaaatgtctgcattattgctctatagattgcttcaaaagggtta 538
Query: 1410 tacaagtgtaatggctacaataatggaagaagaagctgcagagaaacaaaggaagaaagc 1469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 tacaagtgtaatggctacaataatggaagaagaagctgcagagaaacaaaggaagaaagc 598
Query: 1470 tgctgctgctttacaagcagcacaagtagctgcagctgcagcaattcaagcgcagaatac 1529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 tgctgctgctttacaagcagcacaagtagctgcagctgcagcaattcaagcgcagaatac 658
Query: 1530 aaaacctgaatcaaatcaatctacaatgga 1559
|||| |||||||||||||||||||||||||
Sbjct: 659 aaaa-ctgaatcaaatcaatctacaatgga 687
>KJC_c06015
Length = 631
Score = 1229 bits (620), Expect = 0.0
Identities = 630/632 (99%), Gaps = 1/632 (0%)
Strand = Plus / Minus
Query: 47 ggcttagcaaccgaaagattgtagataagtacattaaagacgctagaaaccttattgcaa 106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ggcttagcaaccgaaagattgtagataagtacattaaagacgctagaaaccttattgcaa 572
Query: 107 ctcaggaacagagcgatattgtttccgctctgaatcttctagacgcggctttggctgtgt 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ctcaggaacagagcgatattgtttccgctctgaatcttctagacgcggctttggctgtgt 512
Query: 167 ctcctcgctttgaagtggctttagaacttaaagctagatctttgctttaccttagacgat 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ctcctcgctttgaagtggctttagaacttaaagctagatctttgctttaccttagacgat 452
Query: 227 tcaaggacgtggcggatatgcttcaagactacattccgagtctaaaaatcggaaatgacg 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tcaaggacgtggcggatatgcttcaagactacattccgagtctaaaaatcggaaatgacg 392
Query: 287 agtccggttcggtttcttctgataactcctcatcttcctcgcagcagctctcgagagaac 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 agtccggttcggtttcttctgataactcctcatcttcctcgcagcagctctcgagagaac 332
Query: 347 gagtcaaactcttgtcttctaataactcgtcctcggactcaacggaccgcgatcccagct 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gagtcaaactcttgtcttctaataactcgtcctcggactcaacggaccgcgatcccagct 272
Query: 407 tcaagtgtttctctgtctcggacttgaaaaagaaagtcatggctgggctttgtaaaaatt 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tcaagtgtttctctgtctcggacttgaaaaagaaagtcatggctgggctttgtaaaaatt 212
Query: 467 gcgagaaagaagggcaatggagatacttggttttgggccaagcttgttgtcatctgggtc 526
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 211 gcgagaaagaagggcaatggagatacttgg-tttgggccaagcttgttgtcatctgggtc 153
Query: 527 ttatggaggacgccatggccctcctacaaaccggaaaacgcctttctacagccgcattcc 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 ttatggaggacgccatggccctcctacaaaccggaaaacgcctttctacagccgcattcc 93
Query: 587 gccgggaaagcatttcttggtccgacgatagtttctccatttccaacttcccaatctccg 646
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 gacgggaaagcatttcttggtccgacgatagtttctccatttccaacttcccaatctccg 33
Query: 647 gtgacatatccacttcatcagccccaccaacg 678
||||||||||||||||||||||||||||||||
Sbjct: 32 gtgacatatccacttcatcagccccaccaacg 1