Jatropha Genome Database
- JcCA0028391.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0028391.20 + phase: 1 /TE
(4021 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c11255 1332 0.0
>KJC_c11255
Length = 749
Score = 1332 bits (672), Expect = 0.0
Identities = 734/748 (98%), Gaps = 5/748 (0%)
Strand = Plus / Plus
Query: 690 gagaaacctgctgctgctactgctgtagatccagtacaaaagaagccttatgtgccaaaa 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagaaacctgctgctgctactgctgtagatccagtacaaaagaagccttatgtgccaaaa 60
Query: 750 tgcttcttttgtggaaagacggatcacttgagaaaggactgtcctaaatttgctatttga 809
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcttcttttgtggaaagacggatcacttgagaaaggactgtcctaaatttgctatttgg 120
Query: 810 cttacaaagaagggtaagtgccttgttttagtctgttgtgaagttaatttaacttcagct 869
||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cttgcaaagaggggtaagtaccttgttttagtctgttgtgaagttaatttaacttcagct 180
Query: 870 cctaaaaacacttattgggtggattctggtgctaccgctcatataagtgtttcattgcag 929
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 181 cctaaaaacacttattggatggattctggtgctaccgctcatataagtgtttcattgctg 240
Query: 930 ggctgcctcaactacagaaagccaactgacggtgaaagatacatctatgtgggaaatggc 989
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 241 ggctgcctcaactacagaaagccagctgacggtgaaagatacgtctatgtgggaaatggc 300
Query: 990 gatctggttgaagtagaggcaattggacattttagattatgtttaagtactggctatttt 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatctggttgaagtagaggcaattggacattttagattatgtttaagtactggctatttt 360
Query: 1050 ttggatcttatagatacttttgttattccctcttttagaaggaatttgatttctgtttcc 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttggatcttatagatacttttgttattccctcttttagaaggaatttgatttctgtttcc 420
Query: 1110 tttttggacaaatctggttttcattgttcttttggagacagtgtattcactttatctatg 1169
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 421 tttttggacaaatctggttttcattgttcttttggagacagtatattcactttatctatg 480
Query: 1170 aattcaaaagttttgggtactggttgcttgaatgaatgtgataatctatatatgttagac 1229
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aattc-aaagttttgggtactggttgcttgaatgaatgtgataatctatatatgttagac 539
Query: 1230 attgatactagttatcatgaatccctgcatgttactacaagaggtaccaaaagaaagttg 1289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 attgatactagttatcatgaatccctgcatgttactacaagaggtaccaaaagaaagttg 599
Query: 1290 aatattgataactcagctgtactttggcatagacgtttgggtcatgtatccaaatcaaga 1349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 aatattgataactcagctgtactttggcatagacgtttgggtcatgtatccaaatcaaga 659
Query: 1350 attgagcgtcttgtttctgatggtatcttagatacacttgattacac-aggtttgg-att 1407
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 660 attgagcgtcttgtttctgatggtatcttagatacacttgattacactaggtttggtatt 719
Query: 1408 c-ttgta-ttgagtgtattaaaggaaaa 1433
| ||||| ||||||||||||||||||||
Sbjct: 720 ctttgtatttgagtgtattaaaggaaaa 747