Jatropha Genome Database

JcCA0028391.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0028391.10 + phase: 0 
         (234 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c01360                                                            464   e-131

>KJC_c01360 
          Length = 939

 Score =  464 bits (234), Expect = e-131
 Identities = 234/234 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagtgtcctatgcgtcttttctcaactcttctcctccttctgttgcttcttctggcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 atgaagtgtcctatgcgtcttttctcaactcttctcctccttctgttgcttcttctggcc 529

                                                                       
Query: 61  accgagacggggccgatggtggcggaggcaaggacatgcgagtcgctgagtcatagattt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 accgagacggggccgatggtggcggaggcaaggacatgcgagtcgctgagtcatagattt 589

                                                                       
Query: 121 aagggcatatgtgtgaggaatagtaactgtgctgccatttgccaaacagaaggcttccaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 aagggcatatgtgtgaggaatagtaactgtgctgccatttgccaaacagaaggcttccaa 649

                                                                 
Query: 181 ggaggccattgccgtgggttacgccgtcgatgcttctgtactaagcattgttaa 234
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 ggaggccattgccgtgggttacgccgtcgatgcttctgtactaagcattgttaa 703