Jatropha Genome Database
- JcCA0027271.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0027271.10 + phase: 0 /pseudo/partial
(849 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_s17324 918 0.0
KJC_c04248 779 0.0
KJC_c07529 76 2e-13
>KJC_s17324
Length = 508
Score = 918 bits (463), Expect = 0.0
Identities = 486/490 (99%), Gaps = 3/490 (0%)
Strand = Plus / Minus
Query: 88 ttagtgaagaatcggaaacggaggtttcgtttcactgctaatctctctaaacgctttgag 147
|||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 487 ttagtgaagaatcg-aaacggaggtttcgtttnactgctaatctctctaaa-gctttgag 430
Query: 148 gccgaagccatccgtcgctccaatcaggagaagcttcgagttgcagttttggtctcaaaa 207
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gccgaagccatccgtcgctccaatcaggagaagcttcgagttgcagttttggtctcaaa- 371
Query: 208 gcagctcttcagtttatccattgtcttaatttgtccaatgactacactgtacctgaagag 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gcagctcttcagtttatccattgtcttaatttgtccaatgactacactgtacctgaagag 311
Query: 268 gttgaatctgccggttttaaaatttgtgctgacgagttggcatcaattgttgaaggacat 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gttgaatctgccggttttaaaatttgtgctgacgagttggcatcaattgttgaaggacat 251
Query: 328 gatgtaaagaaactgaaaattcatgacggcgtggagggtattgctgacaaactctccacg 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gatgtaaagaaactgaaaattcatgacggcgtggagggtattgctgacaaactctccacg 191
Query: 388 tcaattgctgatggcatttcaacttctgaggatttgctaaacaaaaggagggaaattcat 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tcaattgctgatggcatttcaacttctgaggatttgctaaacaaaaggagggaaattcat 131
Query: 448 ggagtaaataaattcactgaaagcccaccccggggtttctttgtttttgtttgggaagcc 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ggagtaaataaattcactgaaagcccaccccggggtttctttgtttttgtttgggaagcc 71
Query: 508 cttcaagatatgacacttatgatacttggtgtttgtgcctttgtgtcccttattgttggc 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 cttcaagatatgacacttatgatacttggtgtttgtgcctttgtgtcccttattgttggc 11
Query: 568 atagctatgg 577
||||||||||
Sbjct: 10 atagctatgg 1
>KJC_c04248
Length = 613
Score = 779 bits (393), Expect = 0.0
Identities = 459/473 (97%), Gaps = 11/473 (2%)
Strand = Plus / Minus
Query: 371 ctgacaaactctccacgtcaattgctgatggcatttcaacttctgaggatttgctaaaca 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ctgacaaactctccacgtcaattgctgatggcatttcaacttctgaggatttgctaaaca 554
Query: 431 aaaggagggaaattcatggagtaaataaattcactgaaagcccaccccggggtttctttg 490
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 553 aaaggagggaaattcatggagtaaataaattcactgaaagcccaccc--gggtttcttg- 497
Query: 491 tttttgtttgggaagcccttcaagatatgacacttatgatacttggtgtttgtgcctttg 550
||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 -ttttg---ggtaagcccttcaagatatgacacttatgatacttggtgtttgtgcctttg 441
Query: 551 tgtcccttattgttggcatagctatggaaggatggccaaagggtgcccatgatggacttg 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgtcccttattgttggcatagctatggaaggatggccaaagggtgcccatgatggacttg 381
Query: 611 gaattgttgcaagtattctccttgttgtttttgtcactgccacgagtgattataagcaat 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gaattgttgcaagtattctccttgttgtttttgtcactgccacgagtgattataagcaat 321
Query: 671 ctttgcagttcaaagatttagacaaggaaaagaaaagatatcagttcatgctactagaga 730
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 320 ctttgcagttcaaagatttagacaaggaaaaaaaaagatatcagttcatgctactagaga 261
Query: 731 tggcttcaggcagaaggtctccatttatgatttacttcctggtgactattgttcatcttt 790
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 260 tggcttcaggcagaaggtctccatttatgatttacttcctggtgac-attgttcatcttt 202
Query: 791 ccattggagacctaggttccagcggatggtactttttg-ttctgggttttctt 842
|||||||||||| |||||||||||||||| |||||||| ||||||||||||||
Sbjct: 201 ccattggagacc-aggttccagcggatgg-actttttgtttctgggttttctt 151
>KJC_c07529
Length = 497
Score = 75.8 bits (38), Expect = 2e-13
Identities = 83/98 (84%)
Strand = Plus / Minus
Query: 493 tttgtttgggaagcccttcaagatatgacacttatgatacttggtgtttgtgcctttgtg 552
|||||||||||||||||||| || ||||| ||||||||||| || || ||||| |||||
Sbjct: 100 tttgtttgggaagcccttcatgacatgactcttatgatactcggggtgtgtgctcttgtg 41
Query: 553 tcccttattgttggcatagctatggaaggatggccaaa 590
|| | || ||||||||||| | ||||||||||||||
Sbjct: 40 tctttaatagttggcatagcgacagaaggatggccaaa 3
Score = 56.0 bits (28), Expect = 1e-07
Identities = 79/96 (82%)
Strand = Plus / Minus
Query: 246 tgactacactgtacctgaagaggttgaatctgccggttttaaaatttgtgctgacgagtt 305
|||||||||||||||| ||| || | |||| |||||| |||||||||| || |||||
Sbjct: 346 tgactacactgtacctacagaagtgaaggctgctggttttgaaatttgtgccgatgagtt 287
Query: 306 ggcatcaattgttgaaggacatgatgtaaagaaact 341
| |||||| || ||||| |||||||| ||||||||
Sbjct: 286 aggatcaatagtcgaaggccatgatgtgaagaaact 251