Jatropha Genome Database
- JcCA0023581.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0023581.10 + phase: 1 /partial
(669 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c03062 1312 0.0
>KJC_c03062
Length = 1362
Score = 1312 bits (662), Expect = 0.0
Identities = 669/670 (99%), Gaps = 1/670 (0%)
Strand = Plus / Minus
Query: 1 aaaataatggaaagagtttgctagtgaagaagtatttaggagcagttgcattcaacaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 aaaataatggaaagagtttgctagtgaagaagtatttaggagcagttgcattcaacaata 708
Query: 61 taacaaggttagcgttcggtaagcgattcgtgaactcagagggcataatggatgagcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 taacaaggttagcgttcggtaagcgattcgtgaactcagagggcataatggatgagcaag 648
Query: 121 gccaagaatttaaggcaattgtggccaacggacttaagctaggtgcatcacttgccatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 gccaagaatttaaggcaattgtggccaacggacttaagctaggtgcatcacttgccatgg 588
Query: 181 cagagcatattccatggcttcgctggatgttcccattagaagaggaggcatttgctaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 cagagcatattccatggcttcgctggatgttcccattagaagaggaggcatttgctaagc 528
Query: 241 atggagctcgaagggatcgcctcactcgagctatcatggaagagcatacacttgctcgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 atggagctcgaagggatcgcctcactcgagctatcatggaagagcatacacttgctcgtc 468
Query: 301 agaagagtggaggtgctaagcaacattttgttgacgcattgcttacattgcaggagaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 agaagagtggaggtgctaagcaacattttgttgacgcattgcttacattgcaggagaaat 408
Query: 361 atgatctcagcgaagacaccattattggacttctttgggatatgattactgcaggcatgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 atgatctcagcgaagacaccattattggacttctttgggatatgattactgcaggcatgg 348
Query: 421 acaccactgcaataacagtagaatgggcaatggctgagctaattaagaacccaagggtgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 acaccactgcaataacagtagaatgggcaatggctgagctaattaagaacccaagggtgc 288
Query: 481 aacaaaaggctcaggaagaactagaccgtgtgattgggtttgaaagagtgatgacagagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 aacaaaaggctcaggaagaactagaccgtgtgattgggtttgaaagagtgatgacagagg 228
Query: 541 ctgatttctcaggtctcccatatctacaatgtatagccaaggagggaatgaggttgcacc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 ctgatttctcaggtctcccatatctacaatgtatagccaaggagggaatgaggttgcacc 168
Query: 601 caccaacaccactaatgcttccacaccgtgccaattccaatgtc-aaaattggtggctat 659
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 167 caccaacaccactaatgcttccacaccgtgccaattccaatgtcaaaaattggtggctat 108
Query: 660 gacataccta 669
||||||||||
Sbjct: 107 gacataccta 98